RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 OR2T34Q8NGX1 318 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 OR2T3Q8NH03 318 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 STYXQ8WUJ0 223 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 SLC35F5Q8WV83 523 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 NT5C3BQ969T7 300 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 NTAN1Q96AB6 310 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 FUBP1Q96AE4 644 aaKnown RBP3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 ZUFSPQ96AP4 578 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 NACC2Q96BF6 587 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 RCN3Q96D15 328 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 MARS2Q96GW9 593 aaKnown RBP3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 AHCYL2Q96HN2 611 aaKnown RBP3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 VPS39Q96JC1 886 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 MAGED4Q96JG8 741 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 SLC45A3Q96JT2 553 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 CNBD2Q96M20 576 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 ASB2Q96Q27 587 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 TWNKQ96RR1 684 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 PCYT2Q99447 389 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 DOK1Q99704 481 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 OLFM1Q99784 485 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 MRPL57Q9BQC6 102 aaKnown RBP3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 BCL7BQ9BQE9 202 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 C9orf16Q9BUW7 83 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 TRIM62Q9BVG3 475 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 KIFC1Q9BW19 673 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 GATA5Q9BWX5 397 aaPredicted RBP3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 GBA3Q9H227 469 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 MRPL46Q9H2W6 279 aaKnown RBP3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 HIPK3Q9H422 1215 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 SMARCAD1Q9H4L7 1026 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 DHX35Q9H5Z1 703 aaKnown RBP3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 UGT1A7Q9HAW7 530 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 UGT1A10Q9HAW8 530 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 UGT1A8Q9HAW9 530 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 GALNT9Q9HCQ5 603 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 MYOZ2Q9NPC6 264 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 CCM2LQ9NUG4 571 aaPredicted RBP3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 SETD4Q9NVD3 440 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 MTMR10Q9NXD2 777 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 GIN1Q9NXP7 522 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 DPP3Q9NY33 737 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 TMEM216Q9P0N5 145 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 HSFX1Q9UBD0 423 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 ZNF112Q9UJU3 913 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 APPL1Q9UKG1 709 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 VANGL2Q9ULK5 521 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 FZD10Q9ULW2 581 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 RUVBL1Q9Y265 456 aaKnown RBP3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 B3GNT3Q9Y2A9 372 aa3.51□□□□□ -1.85
RNU6-55P-201ENST00000411092 COL4A4P53420 1690 aaPredicted RBP3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 LOC100653049A0A140TA62 436 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 ZCWPW2A0A1B0GU75 182 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 LACTBL1A8MY62 500 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 TARM1B6A8C7 271 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 H0YAE9 185 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 INO80B-WBP1J3KQ70 363 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 PSMD12O00232 456 aaPredicted RBP3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 TNPO2O14787 897 aaKnown RBP3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 XPO1O14980 1071 aaKnown RBP3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 GRID2O43424 1007 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 XPOTO43592 962 aaKnown RBP3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 MFSD11O43934 449 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 VPS4BO75351 444 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 GPR32O75388 356 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 ERN1O75460 977 aaKnown RBP3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 KRT34O76011 436 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 ANXA9O76027 345 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 SRP72O76094 671 aaKnown RBP3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 OR6B1O95007 311 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 PIGNO95427 931 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 SLC25A27O95847 323 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 NPPAP01160 153 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 CD4P01730 458 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 GPIP06744 558 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 HNRNPCP07910 306 aaKnown RBP eCLIP3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 RBP1P09455 135 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 ERVK-10P10266 1014 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 UMPSP11172 480 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 CKBP12277 381 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 ENO3P13929 434 aaPredicted RBP3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 HSD17B1P14061 328 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 ATP6V1B1P15313 513 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 STMN1P16949 149 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 CYP3A5P20815 502 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 IL10P22301 178 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 ATP5F1P24539 256 aaPredicted RBP3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 PSMA4P25789 261 aaKnown RBP3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 PTPN3P26045 913 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 HSD3B2P26439 372 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 DCKP27707 260 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 PSMB4P28070 264 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 TKTP29401 623 aaKnown RBP3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 ARRB2P32121 409 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 CYP2C18P33260 490 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 MTNR1BP49286 362 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 TMBIM6P55061 237 aa3.5□□□□□ -1.85
RNU6-55P-201ENST00000411092 ELLP55199 621 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms