RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 CCL4P13236 92 aa23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 MCM3P25205 808 aa23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 CSTF2P33240 577 aaKnown RBP eCLIP23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 BDKRB1P46663 353 aa23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 KYNUQ16719 465 aa23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 ARMC6Q6NXE6 501 aa23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 DCUN1D3Q8IWE4 304 aa23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 IFT20Q8IY31 132 aa23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 AGBL5Q8NDL9 886 aa23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 FBF1Q8TES7 1133 aa23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 FOPNLQ96NB1 174 aa23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 CORO1CQ9ULV4 474 aaPredicted RBP23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 NFU1Q9UMS0 254 aa23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 DMXL2Q8TDJ6 3036 aa23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 GSAPA4D1B5 854 aa23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 KRT87PA6NCN2 255 aa23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 MATN4O95460 622 aa23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 C1orf105O95561 183 aa23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 ETV5P41161 510 aa23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 SEPHS1P49903 392 aa23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 PRKAA1Q13131 559 aa23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 GRB7Q14451 532 aa23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 CCSMST1Q4G0I0 132 aa23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 TEX35Q5T0J7 233 aa23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 UBAP2Q5T6F2 1119 aaKnown RBP23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 CACHD1Q5VU97 1274 aa23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 UGT3A1Q6NUS8 523 aa23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 ADGRF3Q8IZF5 1079 aa23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 SLC46A1Q96NT5 459 aa23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 OLFM1Q99784 485 aa23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 OCIAD1Q9NX40 245 aa23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 VWA7Q9Y334 891 aa23.14■■□□□ 1.29
UBE2E3-202ENST00000410062 RBMS1P29558 406 aaKnown RBP23.13■■□□□ 1.29
UBE2E3-202ENST00000410062 SHMT2P34897 504 aa23.13■■□□□ 1.29
UBE2E3-202ENST00000410062 KBTBD12Q3ZCT8 623 aa23.13■■□□□ 1.29
UBE2E3-202ENST00000410062 FAM45BPQ6NSW5 357 aa23.13■■□□□ 1.29
UBE2E3-202ENST00000410062 PAQR3Q6TCH7 311 aa23.13■■□□□ 1.29
UBE2E3-202ENST00000410062 CEP128Q6ZU80 1094 aa23.13■■□□□ 1.29
UBE2E3-202ENST00000410062 FAM129CQ86XR2 697 aa23.13■■□□□ 1.29
UBE2E3-202ENST00000410062 CTAGE3PQ8IX95 158 aa23.13■■□□□ 1.29
UBE2E3-202ENST00000410062 FAM45AQ8TCE6 357 aa23.13■■□□□ 1.29
UBE2E3-202ENST00000410062 ELMO2Q96JJ3 720 aa23.13■■□□□ 1.29
UBE2E3-202ENST00000410062 MAP3K3Q99759 626 aa23.13■■□□□ 1.29
UBE2E3-202ENST00000410062 NINJ2Q9NZG7 142 aa23.13■■□□□ 1.29
UBE2E3-202ENST00000410062 SPAG6O75602 509 aa23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 ANKRD34CP0C6C1 535 aa23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 FGF3P11487 239 aaPredicted RBP23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 SAT1P21673 171 aa23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 FDXRP22570 491 aa23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 STX2P32856 288 aa23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 SKIV2L2P42285 1042 aaKnown RBP23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 KPNA2P52292 529 aaKnown RBP23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 MAPK10P53779 464 aa23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 TTC23LQ6PF05 361 aa23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 PIWIL4Q7Z3Z4 852 aaKnown RBP23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 PRSS42Q7Z5A4 293 aa23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 LSMEM2Q8N112 164 aa23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 LMNTD1Q8N9Z9 388 aa23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 ZCCHC14Q8WYQ9 949 aaKnown RBP23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 PPM1MQ96MI6 270 aa23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 IL17FQ96PD4 163 aa23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 MCMBPQ9BTE3 642 aa23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 MENTQ9BUN1 341 aa23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 TSPYL1Q9H0U9 437 aa23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 ASCL3Q9NQ33 180 aa23.12■■□□□ 1.29
UBE2E3-202ENST00000410062 IGHV5-51A0A0C4DH38 117 aa23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 FAM95CA0A1B0GW59 222 aa23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 EFCAB7A8K855 629 aa23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 TOX3O15405 576 aaPredicted RBP23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 KDM1AO60341 852 aa23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 DXOO77932 396 aaKnown RBP23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 CBSLP0DN79 551 aa23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 ENO3P13929 434 aaPredicted RBP23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 CBSP35520 551 aa23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 PDAP1Q13442 181 aaKnown RBP23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 EFTUD2Q15029 972 aaKnown RBP eCLIP23.11■■□□□ 1.296e-7■■■■■ 47.1
UBE2E3-202ENST00000410062 FBXO38Q6PIJ6 1188 aa23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 CYHR1Q6ZMK1 362 aa23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 NEK10Q6ZWH5 1172 aa23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 RELL1Q8IUW5 271 aa23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 PPM1NQ8N819 430 aa23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 EEF1AKMT1Q8WVE0 214 aa23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 RAD51AP1Q96B01 352 aa23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 CDC42EP4Q9H3Q1 356 aaKnown RBP23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 RHOJQ9H4E5 214 aa23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 ZNF768Q9H5H4 540 aaKnown RBP23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 TXNDC16Q9P2K2 825 aa23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 DKK4Q9UBT3 224 aa23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 POMT2Q9UKY4 750 aa23.11■■□□□ 1.29
UBE2E3-202ENST00000410062 PSIP1O75475 530 aaKnown RBP23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 ITGA2BP08514 1039 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 CHRM5P08912 532 aaPredicted RBP23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 MPC1LP0DKB6 136 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 CD9P21926 228 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 PKLRP30613 574 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 DEKP35659 375 aaKnown RBP23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 CCNFP41002 786 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 RAB28P51157 221 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 IGF2-ASQ6U949 168 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms