RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 TPRG1Q6ZUI0 275 aa23.27■■□□□ 1.32
PMS1-205ENST00000409985 OR2AP1Q8NGE2 309 aa23.27■■□□□ 1.32
PMS1-205ENST00000409985 SLC22A12Q96S37 553 aa23.27■■□□□ 1.32
PMS1-205ENST00000409985 TUBA1CQ9BQE3 449 aa23.27■■□□□ 1.32
PMS1-205ENST00000409985 NTN4Q9HB63 628 aa23.27■■□□□ 1.32
PMS1-205ENST00000409985 LRTM1Q9HBL6 345 aa23.27■■□□□ 1.32
PMS1-205ENST00000409985 ZMYM5Q9UJ78 669 aa23.27■■□□□ 1.32
PMS1-205ENST00000409985 PCDHGA11Q9Y5H2 935 aa23.27■■□□□ 1.32
PMS1-205ENST00000409985 SERTM1A2A2V5 107 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 EPOPA6NHQ4 379 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 UPK1AO00322 258 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 STK16O75716 305 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 RSL1D1O76021 490 aaKnown RBP23.26■■□□□ 1.31
PMS1-205ENST00000409985 GUCA1CO95843 209 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 KRT6AP02538 564 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 KRT6BP04259 564 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 ACPPP15309 386 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 PFKLP17858 780 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 PRPH2P23942 346 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 KRT6CP48668 564 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 RPL38P63173 70 aaKnown RBP23.26■■□□□ 1.31
PMS1-205ENST00000409985 CBX2Q14781 532 aaPredicted RBP23.26■■□□□ 1.31
PMS1-205ENST00000409985 MYBPC3Q14896 1274 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 ATG9BQ674R7 924 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 OR2T12Q8NG77 320 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 MAGEE2Q8TD90 523 aaPredicted RBP23.26■■□□□ 1.31
PMS1-205ENST00000409985 TMIGD2Q96BF3 282 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 ULK4Q96C45 1275 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 ECHDC3Q96DC8 303 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 SCRN2Q96FV2 425 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 MAGEB10Q96LZ2 347 aaPredicted RBP23.26■■□□□ 1.31
PMS1-205ENST00000409985 ZNF334Q9HCZ1 680 aaPredicted RBP23.26■■□□□ 1.31
PMS1-205ENST00000409985 MRPL17Q9NRX2 175 aaKnown RBP23.26■■□□□ 1.31
PMS1-205ENST00000409985 C1orf109Q9NX04 203 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 MYO9BQ13459 2157 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 OBSL1O75147 1896 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 IGLV3-16A0A075B6K0 115 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 A0A1W2PQ67 120 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 ERN1O75460 977 aaKnown RBP23.26■■□□□ 1.31
PMS1-205ENST00000409985 SPATA31D3P0C874 917 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 NELFEP18615 380 aaKnown RBP23.26■■□□□ 1.31
PMS1-205ENST00000409985 PCSK6P29122 969 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 CA5AP35218 305 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 DGKQP52824 942 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 NUP107P57740 925 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 ERVK-21P61565 698 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 DAG1Q14118 895 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 RUNDC3AQ59EK9 446 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 SPATA31D4Q6ZUB0 917 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 DDX53Q86TM3 631 aaKnown RBP23.26■■□□□ 1.31
PMS1-205ENST00000409985 RALGPS2Q86X27 583 aaPredicted RBP23.26■■□□□ 1.31
PMS1-205ENST00000409985 CLDN19Q8N6F1 224 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 ZNF548Q8NEK5 533 aaPredicted RBP23.26■■□□□ 1.31
PMS1-205ENST00000409985 AUTS2Q8WXX7 1259 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 VPS50Q96JG6 964 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 SEPHS2Q99611 448 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 SLC32A1Q9H598 525 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.26■■□□□ 1.31
PMS1-205ENST00000409985 ETAA1Q9NY74 926 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 VAPAQ9P0L0 249 aa23.26■■□□□ 1.31
PMS1-205ENST00000409985 ZNF490Q9ULM2 529 aaPredicted RBP23.26■■□□□ 1.31
PMS1-205ENST00000409985 ZNF821O75541 412 aaPredicted RBP23.25■■□□□ 1.31
PMS1-205ENST00000409985 CLDN9O95484 217 aa23.25■■□□□ 1.31
PMS1-205ENST00000409985 ALBP02768 609 aa23.25■■□□□ 1.31
PMS1-205ENST00000409985 URODP06132 367 aa23.25■■□□□ 1.31
PMS1-205ENST00000409985 PRPS2P11908 318 aa23.25■■□□□ 1.31
PMS1-205ENST00000409985 ARSFP54793 590 aa23.25■■□□□ 1.31
PMS1-205ENST00000409985 MTPNP58546 118 aa23.25■■□□□ 1.31
PMS1-205ENST00000409985 SNRPD1P62314 119 aaKnown RBP23.25■■□□□ 1.31
PMS1-205ENST00000409985 ZXDBP98169 803 aa23.25■■□□□ 1.31
PMS1-205ENST00000409985 CYP4F3Q08477 520 aa23.25■■□□□ 1.31
PMS1-205ENST00000409985 SELPLGQ14242 412 aa23.25■■□□□ 1.31
PMS1-205ENST00000409985 LRRC70Q7Z2Q7 622 aa23.25■■□□□ 1.31
PMS1-205ENST00000409985 ARHGAP22Q7Z5H3 698 aa23.25■■□□□ 1.31
PMS1-205ENST00000409985 SVOPLQ8N434 492 aa23.25■■□□□ 1.31
PMS1-205ENST00000409985 SPPL3Q8TCT6 385 aa23.25■■□□□ 1.31
PMS1-205ENST00000409985 AURKBQ96GD4 344 aaPredicted RBP23.25■■□□□ 1.31
PMS1-205ENST00000409985 MAGIXQ9H6Y5 334 aa23.25■■□□□ 1.31
PMS1-205ENST00000409985 DDX18Q9NVP1 670 aaKnown RBP23.25■■□□□ 1.31
PMS1-205ENST00000409985 DNAJB9Q9UBS3 223 aa23.25■■□□□ 1.31
PMS1-205ENST00000409985 USP22Q9UPT9 525 aa23.25■■□□□ 1.31
PMS1-205ENST00000409985 MAN2B2Q9Y2E5 1009 aa23.25■■□□□ 1.31
PMS1-205ENST00000409985 TRBV5-3A0A0A0MS03 114 aa23.24■■□□□ 1.31
PMS1-205ENST00000409985 PGRP06401 933 aa23.24■■□□□ 1.31
PMS1-205ENST00000409985 RETP07949 1114 aa23.24■■□□□ 1.31
PMS1-205ENST00000409985 UGT1A1P22309 533 aa23.24■■□□□ 1.31
PMS1-205ENST00000409985 UGT1A4P22310 534 aa23.24■■□□□ 1.31
PMS1-205ENST00000409985 UGT1A3P35503 534 aa23.24■■□□□ 1.31
PMS1-205ENST00000409985 UGT1A5P35504 534 aa23.24■■□□□ 1.31
PMS1-205ENST00000409985 PPM1AP35813 382 aa23.24■■□□□ 1.31
PMS1-205ENST00000409985 HLCSP50747 726 aa23.24■■□□□ 1.31
PMS1-205ENST00000409985 CDH15P55291 814 aa23.24■■□□□ 1.31
PMS1-205ENST00000409985 GBX1Q14549 363 aa23.24■■□□□ 1.31
PMS1-205ENST00000409985 IMPG1Q17R60 797 aa23.24■■□□□ 1.31
PMS1-205ENST00000409985 PLEKHG6Q3KR16 790 aa23.24■■□□□ 1.31
PMS1-205ENST00000409985 USP39Q53GS9 565 aaKnown RBP23.24■■□□□ 1.31
PMS1-205ENST00000409985 CCDC97Q96F63 343 aaPredicted RBP23.24■■□□□ 1.31
PMS1-205ENST00000409985 MCCC1Q96RQ3 725 aaPredicted RBP23.24■■□□□ 1.31
PMS1-205ENST00000409985 DOK1Q99704 481 aa23.24■■□□□ 1.31
PMS1-205ENST00000409985 APOL5Q9BWW9 433 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms