RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 SPAG6O75602 509 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 HAUS5O94927 633 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 CAPNS1P04632 268 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 CBSLP0DN79 551 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 POLR2CP19387 275 aaPredicted RBP10.59□□□□□ -0.71
CHMP3-205ENST00000409810 ITIH1P19827 911 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 CBSP35520 551 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 TSPAN7P41732 249 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 SKIV2L2P42285 1042 aaKnown RBP10.59□□□□□ -0.71
CHMP3-205ENST00000409810 ARL4DP49703 201 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 RGS4P49798 205 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 RAB28P51157 221 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 CLCN7P51798 805 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 GBX1Q14549 363 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 FAM45BPQ6NSW5 357 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 TRMT10BQ6PF06 316 aaKnown RBP10.59□□□□□ -0.71
CHMP3-205ENST00000409810 LRRC69Q6ZNQ3 347 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 FAM92BQ6ZTR7 304 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 SLC26A11Q86WA9 606 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 NOA1Q8NC60 698 aaKnown RBP10.59□□□□□ -0.71
CHMP3-205ENST00000409810 ZNF248Q8NDW4 579 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 FAM45AQ8TCE6 357 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 INPP5DQ92835 1189 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 RAD51AP1Q96B01 352 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 TEFMQ96QE5 360 aaKnown RBP10.59□□□□□ -0.71
CHMP3-205ENST00000409810 TAAR9Q96RI9 348 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 GPR21Q99679 349 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 ZPBPQ9BS86 351 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 DDA1Q9BW61 102 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 MOCS1Q9NZB8 636 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 OR6C2Q9NZP2 312 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 TXNDC16Q9P2K2 825 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 POMT2Q9UKY4 750 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 SLC39A10Q9ULF5 831 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 DHRS7Q9Y394 339 aa10.59□□□□□ -0.71
CHMP3-205ENST00000409810 DMXL2Q8TDJ6 3036 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 PIPSLA2A3N6 862 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 BTN3A1O00481 513 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 ZBTB11O95625 1053 aaPredicted RBP10.58□□□□□ -0.72
CHMP3-205ENST00000409810 CATP04040 527 aaKnown RBP10.58□□□□□ -0.72
CHMP3-205ENST00000409810 F7P08709 466 aaPredicted RBP10.58□□□□□ -0.72
CHMP3-205ENST00000409810 MPC1LP0DKB6 136 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 FGF3P11487 239 aaPredicted RBP10.58□□□□□ -0.72
CHMP3-205ENST00000409810 CD9P21926 228 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 CDH3P22223 829 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 STX2P32856 288 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 SEPHS1P49903 392 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 PDAP1Q13442 181 aaKnown RBP10.58□□□□□ -0.72
CHMP3-205ENST00000409810 KYNUQ16719 465 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 KLHL38Q2WGJ6 581 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 DCAF12Q5T6F0 453 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 ZNF549Q6P9A3 640 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 ZDHHC24Q6UX98 284 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 CEACAM20Q6UY09 585 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 CAPN12Q6ZSI9 719 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 GPATCH11Q8N954 259 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 SIDT2Q8NBJ9 832 aaKnown RBP10.58□□□□□ -0.72
CHMP3-205ENST00000409810 KLHL6Q8WZ60 621 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 USP7Q93009 1102 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 FMO2Q99518 471 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 NDNQ99608 321 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 MAP3K3Q99759 626 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 ASPSCR1Q9BZE9 553 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 PLAC1Q9HBJ0 212 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 FBXO8Q9NRD0 319 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 C1GALT1Q9NS00 363 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 OCIAD1Q9NX40 245 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 SLC39A1Q9NY26 324 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 ACTR10Q9NZ32 417 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 SEMA5BQ9P283 1151 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 ICKQ9UPZ9 632 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 PCDHGA3Q9Y5H0 932 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 ANKRD11Q6UB99 2663 aaPredicted RBP10.58□□□□□ -0.72
CHMP3-205ENST00000409810 SDK2Q58EX2 2172 aa10.58□□□□□ -0.72
CHMP3-205ENST00000409810 PMS2P1A4D2B8 440 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 ZNF839A8K0R7 811 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 POLR1CO15160 346 aaPredicted RBP10.57□□□□□ -0.72
CHMP3-205ENST00000409810 TLX3O43711 291 aaPredicted RBP10.57□□□□□ -0.72
CHMP3-205ENST00000409810 MATN4O95460 622 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 C1orf105O95561 183 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 AHSGP02765 367 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 CHRM5P08912 532 aaPredicted RBP10.57□□□□□ -0.72
CHMP3-205ENST00000409810 CCL4P13236 92 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 NELFEP18615 380 aaKnown RBP10.57□□□□□ -0.72
CHMP3-205ENST00000409810 MAP4P27816 1152 aaKnown RBP10.57□□□□□ -0.72
CHMP3-205ENST00000409810 PKLRP30613 574 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 SSTR1P30872 391 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 SLC5A2P31639 672 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 ETV5P41161 510 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 MAGEA4P43358 317 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 BDKRB1P46663 353 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 KPNA2P52292 529 aaKnown RBP10.57□□□□□ -0.72
CHMP3-205ENST00000409810 PPP1CAP62136 330 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 MC2RQ01718 297 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 ACY1Q03154 408 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 FOXM1Q08050 763 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 CUL1Q13616 776 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 KIR2DS3Q14952 304 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 TRADDQ15628 312 aa10.57□□□□□ -0.72
CHMP3-205ENST00000409810 ACSBG2Q5FVE4 666 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms