RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 OR4F21O95013 312 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 NCF2P19878 526 aaPredicted RBP12.14□□□□□ -0.47
CHMP3-204ENST00000409727 CLCNKAP51800 687 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 CCNG1P51959 295 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 HK2P52789 917 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 AP1S2P56377 157 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 ERVPABLB-1P60509 514 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 PFN3P60673 137 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 CDKL1Q00532 357 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 PLOD1Q02809 727 aaPredicted RBP12.14□□□□□ -0.47
CHMP3-204ENST00000409727 TUBB3Q13509 450 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 TSTA3Q13630 321 aaPredicted RBP12.14□□□□□ -0.47
CHMP3-204ENST00000409727 NFATC4Q14934 902 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 PTCHD3Q3KNS1 767 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 METRNLQ641Q3 311 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 MYLK4Q86YV6 388 aaPredicted RBP12.14□□□□□ -0.47
CHMP3-204ENST00000409727 DDIASQ8IXT1 998 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 CLYBLQ8N0X4 340 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 CDYL2Q8N8U2 506 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 LMNTD1Q8N9Z9 388 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 TMEM145Q8NBT3 493 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 UBTD2Q8WUN7 234 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 OR1E3Q8WZA6 343 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 CLDN23Q96B33 292 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 WDR92Q96MX6 357 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 ZDHHC5Q9C0B5 715 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 TCF7L2Q9NQB0 619 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 ZNF225Q9UK10 706 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 PLAGL1Q9UM63 463 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 BTRCQ9Y297 605 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 TDRKHQ9Y2W6 561 aaKnown RBP12.14□□□□□ -0.47
CHMP3-204ENST00000409727 DNAJC15Q9Y5T4 150 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 SLCO1B1Q9Y6L6 691 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 ZFC3H1O60293 1989 aaKnown RBP12.13□□□□□ -0.47
CHMP3-204ENST00000409727 ATP6AP2A0A1C7CYW4 349 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 PRAMEF26H0Y7S4 382 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 ATP6AP2O75787 350 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 ESRRBO95718 433 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 SLC16A8O95907 504 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 SLC35G4P0C7Q5 338 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 ACADLP28330 430 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 HNMTP50135 292 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 CCR5P51681 352 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 KIAA1024LP59773 190 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 PRKG2Q13237 762 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 UBAP2LQ14157 1087 aaKnown RBP12.13□□□□□ -0.47
CHMP3-204ENST00000409727 TCHHL1Q5QJ38 904 aaPredicted RBP12.13□□□□□ -0.47
CHMP3-204ENST00000409727 KANK2Q63ZY3 851 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 LETMD1Q6P1Q0 360 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 DUS1LQ6P1R4 473 aaKnown RBP12.13□□□□□ -0.47
CHMP3-204ENST00000409727 SCIMPQ6UWF3 145 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 CLNKQ7Z7G1 428 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 PDZD3Q86UT5 571 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 RASGRP3Q8IV61 690 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 TCAIMQ8N3R3 496 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 OR13H1Q8NG92 308 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 OR4F6Q8NGB9 312 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 OR5AR1Q8NGP9 310 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 TWIST2Q8WVJ9 160 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 TFGQ92734 400 aaPredicted RBP12.13□□□□□ -0.47
CHMP3-204ENST00000409727 FAR2Q96K12 515 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 MARK4Q96L34 752 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 UHRF1Q96T88 793 aaPredicted RBP12.13□□□□□ -0.47
CHMP3-204ENST00000409727 STN1Q9H668 368 aaKnown RBP12.13□□□□□ -0.47
CHMP3-204ENST00000409727 RMI1Q9H9A7 625 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 STOX2Q9P2F5 926 aaPredicted RBP12.13□□□□□ -0.47
CHMP3-204ENST00000409727 SLC22A14Q9Y267 594 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 WDR37Q9Y2I8 494 aa12.13□□□□□ -0.47
CHMP3-204ENST00000409727 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.13□□□□□ -0.47
CHMP3-204ENST00000409727 DNMT3AQ9Y6K1 912 aaPredicted RBP12.13□□□□□ -0.47
CHMP3-204ENST00000409727 TRPC5OSA6NMA1 111 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 IFRD1O00458 451 aaPredicted RBP12.12□□□□□ -0.47
CHMP3-204ENST00000409727 PI15O43692 258 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 RASGRP1O95267 797 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 LINC00032P0C843 101 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 EPB42P16452 691 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 MAPK9P45984 424 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 CXCL12P48061 93 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 PIK3CGP48736 1102 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 ZXDAP98168 799 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 LSM12Q3MHD2 195 aaKnown RBP12.12□□□□□ -0.47
CHMP3-204ENST00000409727 AGTRAPQ6RW13 159 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 ACAD11Q709F0 780 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 MILR1Q7Z6M3 343 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 FBXL8Q96CD0 374 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 CCDC138Q96M89 665 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 OR2M4Q96R27 311 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 ZNF382Q96SR6 550 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 SLC32A1Q9H598 525 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 AASDHPPTQ9NRN7 309 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 KLQ9UEF7 1012 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 PNMA8BQ9ULN7 279 aaPredicted RBP12.12□□□□□ -0.47
CHMP3-204ENST00000409727 ST14Q9Y5Y6 855 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 PDZK1P1A8MUH7 402 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 SDHDO14521 159 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 PIP5K1BO14986 540 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 CBX6O95503 412 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 OTCP00480 354 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 CAPN1P07384 714 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 FGF4P08620 206 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms