RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 ARNTP27540 789 aa12.71□□□□□ -0.37
PTPRN-202ENST00000409251 GLUD2P49448 558 aa12.71□□□□□ -0.37
PTPRN-202ENST00000409251 CEP78Q5JTW2 689 aa12.71□□□□□ -0.37
PTPRN-202ENST00000409251 LYPD8Q6UX82 237 aa12.71□□□□□ -0.37
PTPRN-202ENST00000409251 NECAB2Q7Z6G3 386 aa12.71□□□□□ -0.37
PTPRN-202ENST00000409251 LRRC49Q8IUZ0 686 aa12.71□□□□□ -0.37
PTPRN-202ENST00000409251 TCAIMQ8N3R3 496 aa12.71□□□□□ -0.37
PTPRN-202ENST00000409251 DTX3Q8N9I9 347 aa12.71□□□□□ -0.37
PTPRN-202ENST00000409251 PDPRQ8NCN5 879 aa12.71□□□□□ -0.37
PTPRN-202ENST00000409251 METTL6Q8TCB7 284 aa12.71□□□□□ -0.37
PTPRN-202ENST00000409251 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.71□□□□□ -0.37
PTPRN-202ENST00000409251 TPD52L3Q96J77 140 aa12.71□□□□□ -0.37
PTPRN-202ENST00000409251 APOL5Q9BWW9 433 aa12.71□□□□□ -0.37
PTPRN-202ENST00000409251 C3orf18Q9UK00 162 aa12.71□□□□□ -0.37
PTPRN-202ENST00000409251 VCANP13611 3396 aa12.71□□□□□ -0.37
PTPRN-202ENST00000409251 CASP8AP2Q9UKL3 1982 aa12.71□□□□□ -0.37
PTPRN-202ENST00000409251 A8MX80 341 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 E9PAM4 449 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 UGT2B11O75310 529 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 GALTP07902 379 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 HTR1AP08908 422 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 POU1F1P28069 291 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 GSTM2P28161 218 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 BMPR1AP36894 532 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 ARSDP51689 593 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 WNT3AP56704 352 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 DEFA1P59665 94 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 DEFA3P59666 94 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 RPS24P62847 133 aaKnown RBP12.71□□□□□ -0.38
PTPRN-202ENST00000409251 POU4F1Q01851 419 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 SEMG2Q02383 582 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 PTGR1Q14914 329 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 WDR45BQ5MNZ6 344 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 TPRG1LQ5T0D9 272 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 CYP20A1Q6UW02 462 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 SLC16A12Q6ZSM3 486 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 DENND1CQ8IV53 801 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 SKA2Q8WVK7 121 aaPredicted RBP12.71□□□□□ -0.38
PTPRN-202ENST00000409251 PSMG2Q969U7 264 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 TEKT5Q96M29 485 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 RMND5AQ9H871 391 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 ABCC13Q9NSE7 274 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 IGSF5Q9NSI5 407 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 NSMCE4AQ9NXX6 385 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 SPEF1Q9Y4P9 236 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 PCM1Q15154 2024 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 SDK1Q7Z5N4 2213 aa12.71□□□□□ -0.38
PTPRN-202ENST00000409251 UPK3BL1B0FP48 263 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 UPK3BL2E5RIL1 263 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 NUAK1O60285 661 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 POU2F1P14859 743 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 CSF2RAP15509 400 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 PFKLP17858 780 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 IGFBP5P24593 272 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 EPHA2P29317 976 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 ACVRL1P37023 503 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 RPL38P63173 70 aaKnown RBP12.7□□□□□ -0.38
PTPRN-202ENST00000409251 DEFB103AP81534 67 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 CAMK2BQ13554 666 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 CTF1Q16619 201 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 NDUFA5Q16718 116 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 ZNF678Q5SXM1 525 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 DENND5AQ6IQ26 1287 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 LCN8Q6JVE9 175 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 PRMT9Q6P2P2 845 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 CYS1Q717R9 158 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 CCDC126Q96EE4 140 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 PAWRQ96IZ0 340 aaKnown RBP12.7□□□□□ -0.38
PTPRN-202ENST00000409251 TIGARQ9NQ88 270 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 LEF1Q9UJU2 399 aaPredicted RBP12.7□□□□□ -0.38
PTPRN-202ENST00000409251 WBP11Q9Y2W2 641 aaKnown RBP12.7□□□□□ -0.38
PTPRN-202ENST00000409251 A0A0C4DFX4 3053 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 A0A096LPI6 279 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 DYRK3O43781 588 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 MED26O95402 600 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 C21orf33P30042 268 aaPredicted RBP12.7□□□□□ -0.38
PTPRN-202ENST00000409251 CASP3P42574 277 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 GALNT3Q14435 633 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 UAP1L1Q3KQV9 507 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 TBRG1Q3YBR2 411 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 PIK3R6Q5UE93 754 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 LINGO4Q6UY18 593 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 SLC22A9Q8IVM8 553 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 TTC30BQ8N4P2 665 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 EFHBQ8N7U6 833 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 TP53I13Q8NBR0 393 aaPredicted RBP12.7□□□□□ -0.38
PTPRN-202ENST00000409251 OR6K2Q8NGY2 324 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 OR52J3Q8NH60 311 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 ADAMTS16Q8TE57 1224 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 IGSF8Q969P0 613 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 GFM1Q96RP9 751 aaKnown RBP12.7□□□□□ -0.38
PTPRN-202ENST00000409251 MMP28Q9H239 520 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 ABCB9Q9NP78 766 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 EIF2B3Q9NR50 452 aaKnown RBP12.7□□□□□ -0.38
PTPRN-202ENST00000409251 ANGPTL3Q9Y5C1 460 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 N6AMT1Q9Y5N5 214 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 OAS3Q9Y6K5 1087 aaKnown RBP12.7□□□□□ -0.38
PTPRN-202ENST00000409251 A0A087X1B8 175 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 NPEPPSL1A6NEC2 478 aa12.7□□□□□ -0.38
PTPRN-202ENST00000409251 M0QZQ0 153 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms