RNA–Protein interactions for RNA: ENST00000408749.1

RNU6ATAC-201, Transcript of RNA, U6atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU6ATAC, Length 126 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC-201ENST00000408749 CHRNA10Q9GZZ6 450 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 WWP1Q9H0M0 922 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 TSPAN10Q9H1Z9 355 aaPredicted RBP3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 SLC26A1Q9H2B4 701 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 LIME1Q9H400 295 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 CLSTN2Q9H4D0 955 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 ZWILCHQ9H900 591 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 ZFYVE1Q9HBF4 777 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 PCDH9Q9HC56 1237 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 GDPD2Q9HCC8 539 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 NT5MQ9NPB1 228 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 DMRT3Q9NQL9 472 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 KLHL1Q9NR64 748 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 INTS7Q9NVH2 962 aaKnown RBP3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 ACTR10Q9NZ32 417 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 TRPS1Q9UHF7 1281 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 GNPTGQ9UJJ9 305 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 DNAJC12Q9UKB3 198 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 ADAM21Q9UKJ8 722 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 PLCL2Q9UPR0 1127 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 WDR37Q9Y2I8 494 aa3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 CFAP20Q9Y6A4 193 aaKnown RBP3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 CHD3Q12873 2000 aaKnown RBP3.7□□□□□ -1.82
RNU6ATAC-201ENST00000408749 CSPG4Q6UVK1 2322 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 RTTNQ86VV8 2226 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 A0A0J9YY10 115 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 ASPDHA6ND91 283 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 RCCD1A6NED2 376 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 FIGNL2A6NMB9 653 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 BTN3A1O00481 513 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 CDK2AP1O14519 115 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 PRPSAP2O60256 369 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 FZD6O60353 706 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 CDC40O60508 579 aaKnown RBP eCLIP3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 CNOT3O75175 753 aaKnown RBP3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 MTX2O75431 263 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 POP7O75817 140 aaKnown RBP3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 MT-CYBP00156 380 aaPredicted RBP3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 TP53P04637 393 aaPredicted RBP3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 PDHA1P08559 390 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 PVRP15151 417 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 ERCC2P18074 760 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 MSH3P20585 1137 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 MMP8P22894 467 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 UQCRC1P31930 480 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 SHMT2P34897 504 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 ZFP36L2P47974 494 aaKnown RBP3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 ZNF165P49910 485 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 NDUFA8P51970 172 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 ZNF143P52747 638 aaPredicted RBP3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 PMS1P54277 932 aaKnown RBP3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 GSCP56915 257 aaPredicted RBP3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 STX17P56962 302 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 OC90Q02509 493 aaPredicted RBP3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 EEF1A2Q05639 463 aaKnown RBP3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 RUNX1T1Q06455 604 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 DMTNQ08495 405 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 NFE2L1Q14494 772 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 GRM7Q14831 915 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 PTPRRQ15256 657 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 MEP1AQ16819 746 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 FAM214AQ32MH5 1076 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 RAB6CQ53S08 254 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 PPP6R3Q5H9R7 873 aaPredicted RBP3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 ERMARDQ5T6L9 678 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 METRNLQ641Q3 311 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 TXNRD3NBQ6F5E7 133 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 KIAA0930Q6ICG6 404 aaPredicted RBP3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 KLHL10Q6JEL2 608 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 CCDC70Q6NSX1 233 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 DNAJC24Q6P3W2 148 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 DCUN1D2Q6PH85 259 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 SPESP1Q6UW49 350 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 PRSS57Q6UWY2 283 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 UNC5DQ6UXZ4 953 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 ARHGAP36Q6ZRI8 547 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 SHISA6Q6ZSJ9 500 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 TTLL10Q6ZVT0 673 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 AMIGO1Q86WK6 493 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 CREBRFQ8IUR6 639 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 LRRC49Q8IUZ0 686 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 ZNF547Q8IVP9 402 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 MCATQ8IVS2 390 aaKnown RBP3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 ARHGAP12Q8IWW6 846 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 FAM20CQ8IXL6 584 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 FAM71AQ8IYT1 594 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 PGBD5Q8N414 524 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 OR10Q1Q8NGQ4 319 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 JOSD2Q8TAC2 188 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 PIGTQ969N2 578 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 TMEM125Q96AQ2 219 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 SEC16BQ96JE7 1060 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 Q96MF0 132 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 PPM1MQ96MI6 270 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 FERD3LQ96RJ6 166 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 WDR24Q96S15 920 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 YIPF4Q9BSR8 244 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 CRACR2AQ9BSW2 395 aa3.69□□□□□ -1.82
RNU6ATAC-201ENST00000408749 TDRD1Q9BXT4 1180 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms