RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 PRKAA1Q13131 559 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 SQSTM1Q13501 440 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 TRA2AQ13595 282 aaKnown RBP eCLIP9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 GBX1Q14549 363 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 KLHL38Q2WGJ6 581 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 TBC1D25Q3MII6 688 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 TTLL9Q3SXZ7 439 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 CCSMST1Q4G0I0 132 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 KLHL35Q6PF15 583 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 UNC5DQ6UXZ4 953 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 KIAA0408Q6ZU52 694 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 PIWIL4Q7Z3Z4 852 aaKnown RBP9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 PRSS42Q7Z5A4 293 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 STRA8Q7Z7C7 330 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 TRIM73Q86UV7 250 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 AMIGO1Q86WK6 493 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 PROSER1Q86XN7 944 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 GSPT2Q8IYD1 628 aaKnown RBP9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 TBC1D21Q8IYX1 336 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 C2orf73Q8N5S3 287 aaPredicted RBP9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 AGBL5Q8NDL9 886 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 SEC14L1Q92503 715 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 NAF1Q96HR8 494 aaKnown RBP9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 ELMO2Q96JJ3 720 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 MAP3K3Q99759 626 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 OLFM1Q99784 485 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 CTRCQ99895 268 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 PHACTR1Q9C0D0 580 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 KLHL25Q9H0H3 589 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 LATS2Q9NRM7 1088 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 SOHLH2Q9NX45 425 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 FOXJ2Q9P0K8 574 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 MTRF1LQ9UGC7 380 aaKnown RBP9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 ZMIZ1Q9ULJ6 1067 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 RAXQ9Y2V3 346 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 PCDHGA8Q9Y5G5 932 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 COMMD10Q9Y6G5 202 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 WDFY3Q8IZQ1 3526 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 USP24Q9UPU5 2620 aa9.98□□□□□ -0.81
TSPAN9-202ENST00000407263 IGHV5-51A0A0C4DH38 117 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 FAM95CA0A1B0GW59 222 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 TLCD2A6NGC4 264 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 ARHGEF33A8MVX0 844 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 CXorf49A8MYA2 514 aaPredicted RBP9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 AHSGP02765 367 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 ANKRD34CP0C6C1 535 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 TPBGLP0DKB5 382 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 FGF3P11487 239 aaPredicted RBP9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 PVRP15151 417 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 CDH3P22223 829 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 ATP5DP30049 168 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 ECHS1P30084 290 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 PEBP1P30086 187 aaKnown RBP9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 PCBP4P57723 403 aaKnown RBP9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 SH3BP2P78314 561 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 FOXM1Q08050 763 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 PDAP1Q13442 181 aaKnown RBP9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 FRG1Q14331 258 aaKnown RBP9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 ZNF460Q14592 562 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 KCNAB1Q14722 419 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 HECTD2Q5U5R9 776 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 ANKS6Q68DC2 871 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 FAM45BPQ6NSW5 357 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 ARHGAP22Q7Z5H3 698 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 CTAGE3PQ8IX95 158 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 FAM45AQ8TCE6 357 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 FBF1Q8TES7 1133 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 CDKL2Q92772 493 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 USP7Q93009 1102 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 LINGO1Q96FE5 620 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 ZDHHC12Q96GR4 267 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 VPS39Q96JC1 886 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 FOPNLQ96NB1 174 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 FMO2Q99518 471 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 ZNF768Q9H5H4 540 aaKnown RBP9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 TFB2MQ9H5Q4 396 aaKnown RBP9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 APMAPQ9HDC9 416 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 THSD1Q9NS62 852 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 SPHK1Q9NYA1 384 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 ACTR10Q9NZ32 417 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 MOCS1Q9NZB8 636 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 NINJ2Q9NZG7 142 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 POLG2Q9UHN1 485 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 POMT2Q9UKY4 750 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 SPTBP11277 2137 aa9.97□□□□□ -0.81
TSPAN9-202ENST00000407263 PIPSLA2A3N6 862 aa9.96□□□□□ -0.82
TSPAN9-202ENST00000407263 CDRT15L2A8MXV6 281 aa9.96□□□□□ -0.82
TSPAN9-202ENST00000407263 C2orf74A8MZ97 194 aa9.96□□□□□ -0.82
TSPAN9-202ENST00000407263 ESPNB1AK53 854 aa9.96□□□□□ -0.82
TSPAN9-202ENST00000407263 ISM1B1AKI9 464 aa9.96□□□□□ -0.82
TSPAN9-202ENST00000407263 HMGB1P1B2RPK0 211 aaPredicted RBP9.96□□□□□ -0.82
TSPAN9-202ENST00000407263 C9orf172C9J069 976 aa9.96□□□□□ -0.82
TSPAN9-202ENST00000407263 TAF4O00268 1085 aa9.96□□□□□ -0.82
TSPAN9-202ENST00000407263 ZNF500O60304 480 aaPredicted RBP9.96□□□□□ -0.82
TSPAN9-202ENST00000407263 KDM1AO60341 852 aa9.96□□□□□ -0.82
TSPAN9-202ENST00000407263 DXOO77932 396 aaKnown RBP9.96□□□□□ -0.82
TSPAN9-202ENST00000407263 C1orf105O95561 183 aa9.96□□□□□ -0.82
TSPAN9-202ENST00000407263 SYF2O95926 243 aaKnown RBP9.96□□□□□ -0.82
TSPAN9-202ENST00000407263 CAPNS1P04632 268 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms