RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 TMPOP42166 694 aaKnown RBP4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 GLUD2P49448 558 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 CD81P60033 236 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 EEF1A1P68104 462 aaKnown RBP4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 CDO1Q16878 200 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 ANKRD20A4Q4UJ75 823 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 ANKRD20A8PQ5CZ79 823 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 XKR9Q5GH70 373 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 PAPPA-AS1Q5QFB9 102 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 ANKRD20A2Q5SQ80 823 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 ANKRD20A1Q5TYW2 823 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 EEF1A1P5Q5VTE0 462 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 ANKRD20A3Q5VUR7 823 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 ZNF449Q6P9G9 518 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 ENPP7Q6UWV6 458 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 FJX1Q86VR8 437 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 HOOK3Q86VS8 718 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 OR5R1Q8NH85 324 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 FIBINQ8TAL6 211 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 SLC38A5Q8WUX1 472 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 TMEM255BQ8WV15 326 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 SLC44A1Q8WWI5 657 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 SMPDL3BQ92485 455 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 C16orf70Q9BSU1 422 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 SEMA6AQ9H2E6 1030 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 LRMDAQ9H2I8 198 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 MMADHCQ9H3L0 296 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 FZD8Q9H461 694 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 RETREG1Q9H6L5 497 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 TBC1D17Q9HA65 648 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 TRPV4Q9HBA0 871 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 TBC1D7Q9P0N9 293 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 VPS18Q9P253 973 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 POLLQ9UGP5 575 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 SIX4Q9UIU6 781 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 ABT1Q9ULW3 272 aaKnown RBP4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 MYO6Q9UM54 1294 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 FRMD4BQ9Y2L6 1034 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 PCDHAC2Q9Y5I4 1007 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 INSL5Q9Y5Q6 135 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 NSD3Q9BZ95 1437 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 FANCIQ9NVI1 1328 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 PRSS51A0A1B0GVH4 220 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 A0A1W2PPQ1 181 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 ELOVL7A1L3X0 281 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 LRRD1A4D1F6 860 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 LINC01553A4QN01 128 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 OR5K3A6NET4 321 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 LILRA5A6NI73 299 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 HEPACAM2A8MVW5 462 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 H3BNX3 289 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 SLC30A4O14863 429 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 ZNF263O14978 683 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 LUC7L3O95232 432 aaKnown RBP4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 GOSR1O95249 250 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 BMP10O95393 424 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 H1F0P07305 194 aaKnown RBP4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 PRSS2P07478 247 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 SAGP10523 405 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 ZNF23P17027 643 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 S1PR1P21453 382 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 ACAT1P24752 427 aaKnown RBP4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 ALDH3A2P51648 485 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 MLLT10P55197 1068 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 COG7P83436 770 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 Q0VFX4 171 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 DHX34Q14147 1143 aaKnown RBP4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 NFE2L1Q14494 772 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 ZNF234Q14588 700 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 RRS1Q15050 365 aaKnown RBP4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 FAM174BQ3ZCQ3 159 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 FUT11Q495W5 492 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 RAB6CQ53S08 254 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 GLRA4Q5JXX5 417 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 MFSD12Q6NUT3 480 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 KLC3Q6P597 504 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 TMPRSS11FQ6ZWK6 438 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 Q75L30 129 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 RYBPQ8N488 228 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 PRR26Q8N8Z3 221 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 KCNH5Q8NCM2 988 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 PSMA8Q8TAA3 256 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 HMGCLL1Q8TB92 370 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 GRAPLQ8TC17 118 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 CCDC107Q8WV48 283 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 DNASE1L2Q92874 299 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 CCDC47Q96A33 483 aaKnown RBP4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 PHF21AQ96BD5 680 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 FAM84BQ96KN1 310 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 C3orf30Q96M34 536 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 PRAM1Q96QH2 718 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 INTS14Q96SY0 518 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 FEVQ99581 238 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 NEURL2Q9BR09 285 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 PANK2Q9BZ23 570 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 RAB6CQ9H0N0 254 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 SMARCAL1Q9NZC9 954 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 ZNF224Q9NZL3 707 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms