RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 CDK4P11802 303 aa28.51■■■□□ 2.16
USP42-202ENST00000404008 E2F1Q01094 437 aa28.51■■■□□ 2.16
USP42-202ENST00000404008 IFFO1Q0D2I5 559 aa28.51■■■□□ 2.16
USP42-202ENST00000404008 CCSMST1Q4G0I0 132 aa28.51■■■□□ 2.16
USP42-202ENST00000404008 EEF1AKMT2Q5JPI9 291 aaKnown RBP28.51■■■□□ 2.16
USP42-202ENST00000404008 TTC23LQ6PF05 361 aa28.51■■■□□ 2.16
USP42-202ENST00000404008 UBE2R2Q712K3 238 aaPredicted RBP28.51■■■□□ 2.16
USP42-202ENST00000404008 FBXO15Q8NCQ5 510 aaPredicted RBP28.51■■■□□ 2.16
USP42-202ENST00000404008 OR10G6Q8NH81 332 aa28.51■■■□□ 2.16
USP42-202ENST00000404008 MAGEC3Q8TD91 643 aa28.51■■■□□ 2.16
USP42-202ENST00000404008 ANKRD7Q92527 254 aa28.51■■■□□ 2.16
USP42-202ENST00000404008 DERL2Q9GZP9 239 aa28.51■■■□□ 2.16
USP42-202ENST00000404008 EPB41L1Q9H4G0 881 aa28.51■■■□□ 2.16
USP42-202ENST00000404008 OGFRQ9NZT2 677 aa28.51■■■□□ 2.16
USP42-202ENST00000404008 TBK1Q9UHD2 729 aa28.51■■■□□ 2.16
USP42-202ENST00000404008 SMIM23A6NLE4 172 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 C2P06681 752 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 CD1CP29017 333 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 GMPRP36959 345 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 SLC26A3P40879 764 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 SP140Q13342 867 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 PPM1JQ5JR12 505 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 NKAIN2Q5VXU1 208 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 MZB1Q8WU39 189 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 LCN9Q8WX39 176 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 DLG3Q92796 817 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 RAD51AP1Q96B01 352 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 NRTNQ99748 197 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 ABCG4Q9H172 646 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 TLK1Q9UKI8 766 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 IKZF3Q9UKT9 509 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 PLAGL1Q9UM63 463 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 ICKQ9UPZ9 632 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 ACOT9Q9Y305 439 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 A0A087X1B8 175 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 A0A096LPK6 155 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 NTN3O00634 580 aaPredicted RBP28.5■■■□□ 2.15
USP42-202ENST00000404008 SLC16A5O15375 505 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 ZBTB14O43829 449 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 KDM1AO60341 852 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 CDH16O75309 829 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 AMZ1Q400G9 498 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 TAF1BQ53T94 588 aaPredicted RBP28.5■■■□□ 2.15
USP42-202ENST00000404008 TIFABQ6ZNK6 161 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 TBC1D1Q86TI0 1168 aaPredicted RBP28.5■■■□□ 2.15
USP42-202ENST00000404008 SPATA6LQ8N4H0 392 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 WDR48Q8TAF3 677 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 MENTQ9BUN1 341 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 SLC12A9Q9BXP2 914 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 ROPN1BQ9BZX4 212 aaPredicted RBP28.5■■■□□ 2.15
USP42-202ENST00000404008 ROPN1Q9HAT0 212 aaPredicted RBP28.5■■■□□ 2.15
USP42-202ENST00000404008 CIDEBQ9UHD4 219 aa28.5■■■□□ 2.15
USP42-202ENST00000404008 MYO1CO00159 1063 aa28.49■■■□□ 2.15
USP42-202ENST00000404008 RASGRF2O14827 1237 aa28.49■■■□□ 2.15
USP42-202ENST00000404008 DUX1O43812 170 aa28.49■■■□□ 2.15
USP42-202ENST00000404008 PROS1P07225 676 aa28.49■■■□□ 2.15
USP42-202ENST00000404008 TYRP1P17643 537 aa28.49■■■□□ 2.15
USP42-202ENST00000404008 KCNA4P22459 653 aa28.49■■■□□ 2.15
USP42-202ENST00000404008 ID4P47928 161 aa28.49■■■□□ 2.15
USP42-202ENST00000404008 SQSTM1Q13501 440 aa28.49■■■□□ 2.15
USP42-202ENST00000404008 IQCKQ8N0W5 287 aa28.49■■■□□ 2.15
USP42-202ENST00000404008 OR4E2Q8NGC2 313 aa28.49■■■□□ 2.15
USP42-202ENST00000404008 RSC1A1Q92681 617 aa28.49■■■□□ 2.15
USP42-202ENST00000404008 AHCYL2Q96HN2 611 aaKnown RBP28.49■■■□□ 2.15
USP42-202ENST00000404008 SRMSQ9H3Y6 488 aa28.49■■■□□ 2.15
USP42-202ENST00000404008 XKR8Q9H6D3 395 aa28.49■■■□□ 2.15
USP42-202ENST00000404008 UNC13CQ8NB66 2214 aa28.48■■■□□ 2.15
USP42-202ENST00000404008 FAM221BA6H8Z2 402 aa28.48■■■□□ 2.15
USP42-202ENST00000404008 KRT87PA6NCN2 255 aa28.48■■■□□ 2.15
USP42-202ENST00000404008 BTN3A1O00481 513 aa28.48■■■□□ 2.15
USP42-202ENST00000404008 RFPL1O75677 317 aa28.48■■■□□ 2.15
USP42-202ENST00000404008 MPOP05164 745 aa28.48■■■□□ 2.15
USP42-202ENST00000404008 CD1DP15813 335 aa28.48■■■□□ 2.15
USP42-202ENST00000404008 MAP4P27816 1152 aaKnown RBP28.48■■■□□ 2.15
USP42-202ENST00000404008 SHMT2P34897 504 aa28.48■■■□□ 2.15
USP42-202ENST00000404008 CAPZBP47756 277 aa28.48■■■□□ 2.15
USP42-202ENST00000404008 IRF9Q00978 393 aa28.48■■■□□ 2.15
USP42-202ENST00000404008 INSM1Q01101 510 aaPredicted RBP28.48■■■□□ 2.15
USP42-202ENST00000404008 DLG1Q12959 904 aa28.48■■■□□ 2.15
USP42-202ENST00000404008 CSHL1Q14406 222 aa28.48■■■□□ 2.15
USP42-202ENST00000404008 SBSNQ6UWP8 590 aa28.48■■■□□ 2.15
USP42-202ENST00000404008 DHRS13Q6UX07 377 aa28.48■■■□□ 2.15
USP42-202ENST00000404008 AMIGO1Q86WK6 493 aa28.48■■■□□ 2.15
USP42-202ENST00000404008 CENPLQ8N0S6 344 aaPredicted RBP28.48■■■□□ 2.15
USP42-202ENST00000404008 RIBC1Q8N443 379 aaPredicted RBP28.48■■■□□ 2.15
USP42-202ENST00000404008 GFM1Q96RP9 751 aaKnown RBP28.48■■■□□ 2.15
USP42-202ENST00000404008 TMEM109Q9BVC6 243 aa28.48■■■□□ 2.15
USP42-202ENST00000404008 SYNDIG1Q9H7V2 258 aa28.48■■■□□ 2.15
USP42-202ENST00000404008 PARVBQ9HBI1 364 aa28.48■■■□□ 2.15
USP42-202ENST00000404008 NPEPPSL1A6NEC2 478 aa28.47■■■□□ 2.15
USP42-202ENST00000404008 CDC7O00311 574 aa28.47■■■□□ 2.15
USP42-202ENST00000404008 AMD1P17707 334 aa28.47■■■□□ 2.15
USP42-202ENST00000404008 CYP2A7P20853 494 aa28.47■■■□□ 2.15
USP42-202ENST00000404008 PKLRP30613 574 aa28.47■■■□□ 2.15
USP42-202ENST00000404008 CSF2RBP32927 897 aa28.47■■■□□ 2.15
USP42-202ENST00000404008 RAB28P51157 221 aa28.47■■■□□ 2.15
USP42-202ENST00000404008 ATP6V0D1P61421 351 aa28.47■■■□□ 2.15
USP42-202ENST00000404008 CFHR1Q03591 330 aa28.47■■■□□ 2.15
USP42-202ENST00000404008 KLHL35Q6PF15 583 aa28.47■■■□□ 2.15
USP42-202ENST00000404008 CYP4X1Q8N118 509 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms