RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 ASPSCR1Q9BZE9 553 aa18.64■□□□□ 0.57
RTN4-207ENST00000402434 PHACTR1Q9C0D0 580 aa18.64■□□□□ 0.57
RTN4-207ENST00000402434 CCDC68Q9H2F9 335 aa18.64■□□□□ 0.57
RTN4-207ENST00000402434 SLC39A1Q9NY26 324 aa18.64■□□□□ 0.57
RTN4-207ENST00000402434 POMT2Q9UKY4 750 aa18.64■□□□□ 0.57
RTN4-207ENST00000402434 LAMA5O15230 3695 aa18.63■□□□□ 0.57
RTN4-207ENST00000402434 RRP8O43159 456 aaKnown RBP18.63■□□□□ 0.57
RTN4-207ENST00000402434 MATN4O95460 622 aa18.63■□□□□ 0.57
RTN4-207ENST00000402434 SHMT2P34897 504 aa18.63■□□□□ 0.57
RTN4-207ENST00000402434 CARSP49589 748 aaKnown RBP18.63■□□□□ 0.57
RTN4-207ENST00000402434 SEPHS1P49903 392 aa18.63■□□□□ 0.57
RTN4-207ENST00000402434 KPNA2P52292 529 aaKnown RBP18.63■□□□□ 0.57
RTN4-207ENST00000402434 DNTTIP2Q5QJE6 756 aaKnown RBP18.63■□□□□ 0.57
RTN4-207ENST00000402434 ZDHHC24Q6UX98 284 aa18.63■□□□□ 0.57
RTN4-207ENST00000402434 KMT5CQ86Y97 462 aa18.63■□□□□ 0.57
RTN4-207ENST00000402434 DCUN1D3Q8IWE4 304 aa18.63■□□□□ 0.57
RTN4-207ENST00000402434 FBXO25Q8TCJ0 367 aa18.63■□□□□ 0.57
RTN4-207ENST00000402434 PMEPA1Q969W9 287 aa18.63■□□□□ 0.57
RTN4-207ENST00000402434 SLC30A3Q99726 388 aa18.63■□□□□ 0.57
RTN4-207ENST00000402434 AARSD1Q9BTE6 412 aaKnown RBP18.63■□□□□ 0.57
RTN4-207ENST00000402434 MENTQ9BUN1 341 aa18.63■□□□□ 0.57
RTN4-207ENST00000402434 XKR8Q9H6D3 395 aa18.63■□□□□ 0.57
RTN4-207ENST00000402434 PPANQ9NQ55 473 aaKnown RBP18.63■□□□□ 0.57
RTN4-207ENST00000402434 OR6C2Q9NZP2 312 aa18.63■□□□□ 0.57
RTN4-207ENST00000402434 FOXJ2Q9P0K8 574 aa18.63■□□□□ 0.57
RTN4-207ENST00000402434 SSUH2Q9Y2M2 353 aa18.63■□□□□ 0.57
RTN4-207ENST00000402434 TDRKHQ9Y2W6 561 aaKnown RBP18.63■□□□□ 0.57
RTN4-207ENST00000402434 B3GALT1Q9Y5Z6 326 aa18.63■□□□□ 0.57
RTN4-207ENST00000402434 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.62■□□□□ 0.57
RTN4-207ENST00000402434 KDM1AO60341 852 aa18.62■□□□□ 0.57
RTN4-207ENST00000402434 CD82P27701 267 aa18.62■□□□□ 0.57
RTN4-207ENST00000402434 PRDX3P30048 256 aaKnown RBP18.62■□□□□ 0.57
RTN4-207ENST00000402434 PLTPP55058 493 aa18.62■□□□□ 0.57
RTN4-207ENST00000402434 SLC7A5Q01650 507 aa18.62■□□□□ 0.57
RTN4-207ENST00000402434 GRB7Q14451 532 aa18.62■□□□□ 0.57
RTN4-207ENST00000402434 KYNUQ16719 465 aa18.62■□□□□ 0.57
RTN4-207ENST00000402434 ACSBG2Q5FVE4 666 aa18.62■□□□□ 0.57
RTN4-207ENST00000402434 DCAF12Q5T6F0 453 aa18.62■□□□□ 0.57
RTN4-207ENST00000402434 ANKS6Q68DC2 871 aa18.62■□□□□ 0.57
RTN4-207ENST00000402434 CFAP61Q8NHU2 1237 aa18.62■□□□□ 0.57
RTN4-207ENST00000402434 GIMAP7Q8NHV1 300 aa18.62■□□□□ 0.57
RTN4-207ENST00000402434 PYROXD1Q8WU10 500 aa18.62■□□□□ 0.57
RTN4-207ENST00000402434 DCBLD2Q96PD2 775 aa18.62■□□□□ 0.57
RTN4-207ENST00000402434 TEFMQ96QE5 360 aaKnown RBP18.62■□□□□ 0.57
RTN4-207ENST00000402434 DPH1Q9BZG8 443 aa18.62■□□□□ 0.57
RTN4-207ENST00000402434 DHRS7Q9Y394 339 aa18.62■□□□□ 0.57
RTN4-207ENST00000402434 C2orf74A8MZ97 194 aa18.61■□□□□ 0.57
RTN4-207ENST00000402434 C1orf105O95561 183 aa18.61■□□□□ 0.57
RTN4-207ENST00000402434 TIAL1Q01085 375 aaKnown RBP eCLIP18.61■□□□□ 0.57
RTN4-207ENST00000402434 MGAT5Q09328 741 aa18.61■□□□□ 0.57
RTN4-207ENST00000402434 NEK10Q6ZWH5 1172 aa18.61■□□□□ 0.57
RTN4-207ENST00000402434 SPACA3Q8IXA5 215 aa18.61■□□□□ 0.57
RTN4-207ENST00000402434 SIDT2Q8NBJ9 832 aaKnown RBP18.61■□□□□ 0.57
RTN4-207ENST00000402434 KCNE4Q8WWG9 221 aa18.61■□□□□ 0.57
RTN4-207ENST00000402434 PPM1MQ96MI6 270 aa18.61■□□□□ 0.57
RTN4-207ENST00000402434 ZPBPQ9BS86 351 aa18.61■□□□□ 0.57
RTN4-207ENST00000402434 PITPNM3Q9BZ71 974 aa18.61■□□□□ 0.57
RTN4-207ENST00000402434 SAYSD1Q9NPB0 183 aa18.61■□□□□ 0.57
RTN4-207ENST00000402434 C1GALT1Q9NS00 363 aa18.61■□□□□ 0.57
RTN4-207ENST00000402434 NFS1Q9Y697 457 aa18.61■□□□□ 0.57
RTN4-207ENST00000402434 PTPRQQ9UMZ3 2332 aa18.61■□□□□ 0.57
RTN4-207ENST00000402434 CTAGE15A4D2H0 777 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 ZBTB11O95625 1053 aaPredicted RBP18.6■□□□□ 0.57
RTN4-207ENST00000402434 CTAGE8P0CG41 777 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 CD9P21926 228 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 RAB28P51157 221 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 SH3BP2P78314 561 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 HSD11B2P80365 405 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 IL11RAQ14626 422 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 KLHL38Q2WGJ6 581 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 TTLL9Q3SXZ7 439 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 CEACAM20Q6UY09 585 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 LRRC69Q6ZNQ3 347 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 CYS1Q717R9 158 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 CTAGE6Q86UF2 777 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 DTX1Q86Y01 620 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 CTAGE4Q8IX94 777 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 NOA1Q8NC60 698 aaKnown RBP18.6■□□□□ 0.57
RTN4-207ENST00000402434 CD200R1Q8TD46 325 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 SKA2Q8WVK7 121 aaPredicted RBP18.6■□□□□ 0.57
RTN4-207ENST00000402434 INPP5DQ92835 1189 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 RAD51AP1Q96B01 352 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 NAF1Q96HR8 494 aaKnown RBP18.6■□□□□ 0.57
RTN4-207ENST00000402434 FOPNLQ96NB1 174 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 GPR21Q99679 349 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 SPRY4Q9C004 299 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 APMAPQ9HDC9 416 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 ACTR10Q9NZ32 417 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 SLC17A6Q9P2U8 582 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 RUVBL2Q9Y230 463 aaKnown RBP18.6■□□□□ 0.57
RTN4-207ENST00000402434 ZFHX4Q86UP3 3567 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 SDK2Q58EX2 2172 aa18.6■□□□□ 0.57
RTN4-207ENST00000402434 ESYT3A0FGR9 886 aa18.59■□□□□ 0.57
RTN4-207ENST00000402434 PIPSLA2A3N6 862 aa18.59■□□□□ 0.57
RTN4-207ENST00000402434 GSAPA4D1B5 854 aa18.59■□□□□ 0.57
RTN4-207ENST00000402434 POLR1CO15160 346 aaPredicted RBP18.59■□□□□ 0.57
RTN4-207ENST00000402434 VPS26AO75436 327 aa18.59■□□□□ 0.57
RTN4-207ENST00000402434 CHRM5P08912 532 aaPredicted RBP18.59■□□□□ 0.57
RTN4-207ENST00000402434 ITPKBP27987 946 aa18.59■□□□□ 0.57
RTN4-207ENST00000402434 PKLRP30613 574 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms