RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 PRKACGP22612 351 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 SLC7A1P30825 629 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 BDKRB1P46663 353 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 RAD23AP54725 363 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 CAP1Q01518 475 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 OCA2Q04671 838 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 GK3PQ14409 553 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 NUDT18Q6ZVK8 323 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 CYP2U1Q7Z449 544 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 CD200R1Q8TD46 325 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 C1orf109Q9NX04 203 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 RAPGEFL1Q9UHV5 662 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 NPIPB15A6NHN6 443 aaPredicted RBP13.21□□□□□ -0.29
SIRPA-203ENST00000400068 PITPNM1O00562 1244 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 DFNA5O60443 496 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 LEFTY1O75610 366 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 MEF2AQ02078 507 aaPredicted RBP13.21□□□□□ -0.29
SIRPA-203ENST00000400068 OR4F3Q6IEY1 312 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 ATG14Q6ZNE5 492 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 TPRG1Q6ZUI0 275 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 CNTN4Q8IWV2 1026 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 OR52J3Q8NH60 311 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 SUN5Q8TC36 379 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 CXorf40AQ8TE69 158 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 SLC47A1Q96FL8 570 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 ZNF556Q9HAH1 456 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 RASSF1Q9NS23 344 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 IMPAD1Q9NX62 359 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 CLEC4EQ9ULY5 219 aa13.21□□□□□ -0.29
SIRPA-203ENST00000400068 ABHD14A-ACY1A0A1B0GW23 586 aa13.21□□□□□ -0.3
SIRPA-203ENST00000400068 A0A1W2PP18 115 aa13.21□□□□□ -0.3
SIRPA-203ENST00000400068 WASH4PA8MWX3 477 aa13.21□□□□□ -0.3
SIRPA-203ENST00000400068 ALDOCP09972 364 aaKnown RBP13.21□□□□□ -0.3
SIRPA-203ENST00000400068 RPS14P62263 151 aaKnown RBP13.21□□□□□ -0.3
SIRPA-203ENST00000400068 C16orf72Q14CZ0 275 aa13.21□□□□□ -0.3
SIRPA-203ENST00000400068 LYPLAL1Q5VWZ2 237 aa13.21□□□□□ -0.3
SIRPA-203ENST00000400068 GALNT10Q86SR1 603 aa13.21□□□□□ -0.3
SIRPA-203ENST00000400068 MMAAQ8IVH4 418 aaKnown RBP13.21□□□□□ -0.3
SIRPA-203ENST00000400068 CLP1Q92989 425 aaKnown RBP13.21□□□□□ -0.3
SIRPA-203ENST00000400068 CGREF1Q99674 301 aa13.21□□□□□ -0.3
SIRPA-203ENST00000400068 SMAD5Q99717 465 aaKnown RBP13.21□□□□□ -0.3
SIRPA-203ENST00000400068 FAM192AQ9GZU8 254 aa13.21□□□□□ -0.3
SIRPA-203ENST00000400068 ZDHHC3Q9NYG2 299 aa13.21□□□□□ -0.3
SIRPA-203ENST00000400068 IL17CQ9P0M4 197 aa13.21□□□□□ -0.3
SIRPA-203ENST00000400068 ZNF510Q9Y2H8 683 aa13.21□□□□□ -0.3
SIRPA-203ENST00000400068 PCDHGA7Q9Y5G6 932 aa13.21□□□□□ -0.3
SIRPA-203ENST00000400068 PRSS21Q9Y6M0 314 aa13.21□□□□□ -0.3
SIRPA-203ENST00000400068 ARID2Q68CP9 1835 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 ELOVL7A1L3X0 281 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 TTC34A8MYJ7 566 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 FAM155AB1AL88 458 aaPredicted RBP13.2□□□□□ -0.3
SIRPA-203ENST00000400068 SBK3P0C264 359 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 HMGCLP35914 325 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 SF1Q15637 639 aaKnown RBP13.2□□□□□ -0.3
SIRPA-203ENST00000400068 NANOGP8Q6NSW7 305 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 RRM2BQ7LG56 351 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 LIMS2Q7Z4I7 341 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 FBXL20Q96IG2 436 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 ZFRQ96KR1 1074 aaKnown RBP13.2□□□□□ -0.3
SIRPA-203ENST00000400068 GPR78Q96P69 363 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 NANOGQ9H9S0 305 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 IMP3Q9NV31 184 aaKnown RBP13.2□□□□□ -0.3
SIRPA-203ENST00000400068 USP22Q9UPT9 525 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 A0A087WXM4 84 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 M0R3G1 203 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 NME4O00746 187 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 CDH2P19022 906 aaPredicted RBP13.2□□□□□ -0.3
SIRPA-203ENST00000400068 RPL10P27635 214 aaKnown RBP13.2□□□□□ -0.3
SIRPA-203ENST00000400068 TRIM71Q2Q1W2 868 aaKnown RBP13.2□□□□□ -0.3
SIRPA-203ENST00000400068 PAGE3Q5JUK9 113 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 SLC8B1Q6J4K2 584 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 SUSD1Q6UWL2 747 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 ADI1Q9BV57 179 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 PNPLA3Q9NST1 481 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 NDUFA13Q9P0J0 144 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 SH3GLB1Q9Y371 365 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 FAM234BA2RU67 622 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 PCCBP05166 539 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 ANXA4P09525 319 aaPredicted RBP13.2□□□□□ -0.3
SIRPA-203ENST00000400068 VIPR2P41587 438 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 RPS9P46781 194 aaKnown RBP13.2□□□□□ -0.3
SIRPA-203ENST00000400068 CLK1P49759 484 aaKnown RBP13.2□□□□□ -0.3
SIRPA-203ENST00000400068 ZNF140P52738 457 aaPredicted RBP13.2□□□□□ -0.3
SIRPA-203ENST00000400068 NR1H2P55055 460 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 SGCGQ13326 291 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 RFTN2Q52LD8 501 aaPredicted RBP13.2□□□□□ -0.3
SIRPA-203ENST00000400068 PPP4R4Q6NUP7 873 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 KBTBD6Q86V97 674 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 TBC1D21Q8IYX1 336 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 SCML4Q8N228 414 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 RNF175Q8N4F7 328 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 RAB42Q8N4Z0 105 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 HDAC2Q92769 488 aaKnown RBP13.2□□□□□ -0.3
SIRPA-203ENST00000400068 CENPNQ96H22 339 aaPredicted RBP13.2□□□□□ -0.3
SIRPA-203ENST00000400068 ZCCHC2Q9C0B9 1178 aaKnown RBP13.2□□□□□ -0.3
SIRPA-203ENST00000400068 PAIP1Q9H074 479 aaKnown RBP13.2□□□□□ -0.3
SIRPA-203ENST00000400068 SCN3BQ9NY72 215 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 PCTPQ9UKL6 214 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 CLCA2Q9UQC9 943 aa13.2□□□□□ -0.3
SIRPA-203ENST00000400068 SAMHD1Q9Y3Z3 626 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms