RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 FAM83DQ9H4H8 585 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 SPIN1Q9Y657 262 aaPredicted RBP11.44□□□□□ -0.58
HLCS-202ENST00000399120 OR6C70A6NIJ9 312 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 CLEC3AO75596 197 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 DDNO94850 711 aaPredicted RBP11.44□□□□□ -0.58
HLCS-202ENST00000399120 CYP3A4P08684 503 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 SLC1A2P43004 574 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 LCP2Q13094 533 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 DUSP4Q13115 394 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 STRADAQ7RTN6 431 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 KCTD7Q96MP8 289 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 C1orf109Q9NX04 203 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 C13orf42A0A1B0GVH6 325 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 ADM5C9JUS6 153 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 CSTF2P33240 577 aaKnown RBP eCLIP11.44□□□□□ -0.581e-6■■■□□ 19.1
HLCS-202ENST00000399120 MARCKSL1P49006 195 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 SLC10A7Q0GE19 358 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 PRAMEF19Q5SWL8 479 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 PRPF38BQ5VTL8 546 aaKnown RBP11.44□□□□□ -0.58
HLCS-202ENST00000399120 KIAA1161Q6NSJ0 714 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 CD300LFQ8TDQ1 290 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 RAB2BQ8WUD1 216 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 NMUR2Q9GZQ4 415 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 SLC5A7Q9GZV3 580 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 MSI1O43347 362 aaKnown RBP11.44□□□□□ -0.58
HLCS-202ENST00000399120 C8GP07360 202 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 OC90Q02509 493 aaPredicted RBP11.44□□□□□ -0.58
HLCS-202ENST00000399120 TIGD6Q17RP2 521 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 LRRC52Q8N7C0 313 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 SPPL2BQ8TCT7 592 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 COPS5Q92905 334 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 GLIS2Q9BZE0 524 aaPredicted RBP11.44□□□□□ -0.58
HLCS-202ENST00000399120 TBL1XR1Q9BZK7 514 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 DPAGT1Q9H3H5 408 aa11.44□□□□□ -0.58
HLCS-202ENST00000399120 TEX13DA0A0J9YY54 714 aaPredicted RBP11.43□□□□□ -0.58
HLCS-202ENST00000399120 TOR1BO14657 336 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 ITGA5P08648 1049 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 GLP1RP43220 463 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 GLUD2P49448 558 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 CRISP3P54108 245 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 ATAD1Q8NBU5 361 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 OR5K1Q8NHB7 308 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 SHC3Q92529 594 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 ACSS2Q9NR19 701 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 PNO1Q9NRX1 252 aaKnown RBP11.43□□□□□ -0.58
HLCS-202ENST00000399120 EMC3Q9P0I2 261 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 ABCA8O94911 1581 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 CAPN14A8MX76 684 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 NT5C1B-RDH14C9J2C7 533 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 HSPA12AO43301 675 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 ENTPD6O75354 484 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 RBM48Q5RL73 367 aaKnown RBP11.43□□□□□ -0.58
HLCS-202ENST00000399120 CPNE9Q8IYJ1 553 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 GBA3Q9H227 469 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 ZNF226Q9NYT6 803 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 NOP16Q9Y3C1 178 aaKnown RBP11.43□□□□□ -0.58
HLCS-202ENST00000399120 SPATA31A6Q5VVP1 1343 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 FSCN2O14926 492 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 VAMP1P23763 118 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 PRKCHP24723 683 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 CD40LGP29965 261 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 C1QTNF8P60827 252 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 RPL6Q02878 288 aaKnown RBP11.43□□□□□ -0.58
HLCS-202ENST00000399120 TAF10Q12962 218 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 SLC1A5Q15758 541 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 C3orf33Q6P1S2 294 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 SYNPOQ8N3V7 929 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 C16orf58Q96GQ5 468 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 MRPS30Q9NP92 439 aaKnown RBP11.43□□□□□ -0.58
HLCS-202ENST00000399120 E9PAM4 449 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 TNFRSF10BO14763 440 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 NOBOXO60393 691 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 GRM5P41594 1212 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 XKP51811 444 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 NCBP2P52298 156 aaKnown RBP eCLIP11.43□□□□□ -0.58
HLCS-202ENST00000399120 HERV-K104P61576 105 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 ZNF792Q3KQV3 632 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 CLNKQ7Z7G1 428 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 KCT2Q8NC54 265 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 HERVK_113Q902F9 699 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 CAMK1GQ96NX5 476 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 MND1Q9BWT6 205 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 POLR2J3Q9H1A7 115 aaKnown RBP11.43□□□□□ -0.58
HLCS-202ENST00000399120 TLL2Q9Y6L7 1015 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 CASZ1Q86V15 1759 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 TSPOAP1O95153 1857 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 GPR89AB7ZAQ6 455 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 HMGN1P05114 100 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 GPR89BP0CG08 455 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 STRA6Q9BX79 667 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 IL25Q9H293 177 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 RUVBL1Q9Y265 456 aaKnown RBP11.43□□□□□ -0.58
HLCS-202ENST00000399120 CNTNAP1P78357 1384 aa11.43□□□□□ -0.58
HLCS-202ENST00000399120 ACOX3O15254 700 aa11.42□□□□□ -0.58
HLCS-202ENST00000399120 NARSO43776 548 aaKnown RBP11.42□□□□□ -0.58
HLCS-202ENST00000399120 MAFKO60675 156 aa11.42□□□□□ -0.58
HLCS-202ENST00000399120 SEC13P55735 322 aa11.42□□□□□ -0.58
HLCS-202ENST00000399120 NOMO1Q15155 1222 aa11.42□□□□□ -0.58
HLCS-202ENST00000399120 DCBLD1Q8N8Z6 715 aa11.42□□□□□ -0.58
HLCS-202ENST00000399120 OR5J2Q8NH18 312 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms