RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ATRNL1Q5VV63 1379 aa8.22□□□□□ -1.09
SPTLC3-201ENST00000399002 A8MUI8 341 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 LRRC37A3O60309 1634 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 TSPAN9O75954 239 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 OR4F21O95013 312 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 CYB5AP00167 134 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 FESP07332 822 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 SLC6A4P31645 630 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 RFC2P35250 354 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 GRIA2P42262 883 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 ASTE1Q2TB18 679 aaPredicted RBP8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 ACDQ96AP0 544 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 FAM84AQ96KN4 292 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 EXOC2Q96KP1 924 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 GATA5Q9BWX5 397 aaPredicted RBP8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 B3GNT5Q9BYG0 378 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 PRRG4Q9BZD6 226 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 TRNAU1APQ9NX07 287 aaKnown RBP8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 RABL2AQ9UBK7 228 aaPredicted RBP8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 RABL2BQ9UNT1 228 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 BAIAP2Q9UQB8 552 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 PCDHGB5Q9Y5G0 923 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 CDK14O94921 469 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 CD2P06729 351 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 ITPKBP27987 946 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 MPIP34949 423 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 GRIK5Q16478 980 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 CLEC6AQ6EIG7 209 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 SLC35B2Q8TB61 432 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 DNAJA4Q8WW22 397 aaPredicted RBP8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 ZUFSPQ96AP4 578 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 TBATAQ96M53 351 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 TRNT1Q96Q11 434 aaKnown RBP8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 SLC39A3Q9BRY0 314 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 BCO2Q9BYV7 579 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 DERL2Q9GZP9 239 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 HCN3Q9P1Z3 774 aa8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 RBM7Q9Y580 266 aaKnown RBP8.21□□□□□ -1.09
SPTLC3-201ENST00000399002 EFCAB9A8MZ26 197 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 MATN4O95460 622 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 PIRTP0C851 137 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 AOC1P19801 751 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 PROZP22891 400 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 NUMBP49757 651 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 AQP4P55087 323 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 NFKB2Q00653 900 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 PAFAH1B3Q15102 231 aaKnown RBP8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 PPM1JQ5JR12 505 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 ZNF783Q6ZMS7 281 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 TMEM17Q86X19 198 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 ZNF548Q8NEK5 533 aaPredicted RBP8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 EXOSC8Q96B26 276 aaKnown RBP8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 RGMAQ96B86 450 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 CMTM7Q96FZ5 175 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 PLEKHA1Q9HB21 404 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 TCF7L1Q9HCS4 588 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 PADI3Q9ULW8 664 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 NALCNQ8IZF0 1738 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 OR1F1O43749 312 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 HPRP00739 348 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 S100A6P06703 90 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 TFPIP10646 304 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 ZNF823P16415 610 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 PEX2P28328 305 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 ERP29P30040 261 aaKnown RBP8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 CLCNKBP51801 687 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 TXNL4AP83876 142 aaKnown RBP8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 ILF3Q12906 894 aaKnown RBP eCLIP8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 CNPY1Q3B7I2 92 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 SDHAF4Q5VUM1 108 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 BAIAP2L2Q6UXY1 529 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 CFAP52Q8N1V2 620 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 CLHC1Q8NHS4 586 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 KCTD7Q96MP8 289 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 CCM2Q9BSQ5 444 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 COPS4Q9BT78 406 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 COQ10BQ9H8M1 238 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 EIF2B4Q9UI10 523 aaKnown RBP8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 PPIEQ9UNP9 301 aaKnown RBP8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 MRPS17Q9Y2R5 130 aaKnown RBP8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 PCDHGA10Q9Y5H3 936 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 FKBP7Q9Y680 259 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 DPPA5A6NC42 116 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 AGPSO00116 658 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 AKAP8O43823 692 aaKnown RBP8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 SLC19A2O60779 497 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 VNN1O95497 513 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 UGT2B4P06133 528 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 PRAMEF19Q5SWL8 479 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 UBXN11Q5T124 520 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 CDCA2Q69YH5 1023 aaPredicted RBP8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 NCBP2-AS2Q69YL0 99 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 SLC30A6Q6NXT4 461 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 ZDHHC24Q6UX98 284 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 HCAR2Q8TDS4 363 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 CNDP2Q96KP4 475 aaKnown RBP8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 EPYCQ99645 322 aa8.21□□□□□ -1.1
SPTLC3-201ENST00000399002 FABP12A6NFH5 140 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 SEPT4O43236 478 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 PIM1P11309 404 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms