RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 FAM131AQ6UXB0 335 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 SMG8Q8ND04 991 aaKnown RBP14□□□□□ -0.17
PCDHA11-201ENST00000398640 AP3S1Q92572 193 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 CEP295NLQ96MC4 621 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 NKIRAS2Q9NYR9 191 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 MFHAS1Q9Y4C4 1052 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 NOS1APO75052 506 aaPredicted RBP13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 FABP3P05413 133 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 CTSAP10619 480 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 CRHR1P34998 444 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 MYBPC3Q14896 1274 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 ZC3H14Q6PJT7 736 aaKnown RBP13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 ZNF852Q6ZMS4 543 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 RBM44Q6ZP01 1051 aaKnown RBP13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 PIK3C3Q8NEB9 887 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 OR2L5Q8NG80 312 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 NCSTNQ92542 709 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 ALG2Q9H553 416 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 NUDT4Q9NZJ9 180 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 IRAK3Q9Y616 596 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 PEX12O00623 359 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 AP2A1O95782 977 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 POU2F1P14859 743 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 DNASE1L1P49184 302 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 PTGES3Q15185 160 aaKnown RBP13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 ANKRD22Q5VYY1 191 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 TRABD2AQ86V40 505 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 CHST4Q8NCG5 386 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 POLE3Q9NRF9 147 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 EIF2B4Q9UI10 523 aaKnown RBP13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 DHRS7Q9Y394 339 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 BTN3A3O00478 584 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 RGS20O76081 388 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 IL10RBQ08334 325 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 NPY5RQ15761 445 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 SNX33Q8WV41 574 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 SMARCD2Q92925 531 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 CHMP1AQ9HD42 196 aaPredicted RBP13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 PLLPQ9Y342 182 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 AK5Q9Y6K8 562 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 TNFRSF11BO00300 401 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 MATN3O15232 486 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 SERPINA1P01009 418 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 TPSB2P20231 275 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 TPSAB1Q15661 275 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 GDPD4Q6W3E5 623 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 KCTD8Q6ZWB6 473 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 YTHDF3Q7Z739 585 aaKnown RBP13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 CHERPQ8IWX8 916 aaKnown RBP13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 CPNE9Q8IYJ1 553 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 TFAP2BQ92481 460 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 RTKNQ9BST9 563 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 GPR62Q9BZJ7 368 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 PLEKHA1Q9HB21 404 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 CYP8B1Q9UNU6 501 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 AP4B1Q9Y6B7 739 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 MYH13Q9UKX3 1938 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 TCRBV21S2A2A0A5A6 115 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 HEPACAM2A8MVW5 462 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 H3BQ06 376 aaPredicted RBP13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 M0R2N6 131 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 OR4F21O95013 312 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 IFNA6P05013 189 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 MAGP20916 626 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 CD247P20963 164 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 ASMTP46597 345 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 SLC35G1Q2M3R5 365 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 RGS21Q2M5E4 152 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 DENND5AQ6IQ26 1287 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 C1QTNF1Q9BXJ1 281 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 GJD2Q9UKL4 321 aa13.99□□□□□ -0.17
PCDHA11-201ENST00000398640 ADAMTS3O15072 1205 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 MTX2O75431 263 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 DEFB103AP81534 67 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 GHRHRQ02643 423 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 SULT1C3Q6IMI6 304 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 ZSCAN1Q8NBB4 408 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 FATE1Q969F0 183 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 TRIM63Q969Q1 353 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 ARMC5Q96C12 935 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 OTUB2Q96DC9 234 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 CLCA3PQ9Y6N3 262 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 RSL1D1O76021 490 aaKnown RBP13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 CBX5P45973 191 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 IL18Q14116 193 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 OSTM1Q86WC4 334 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 SLC44A1Q8WWI5 657 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 GAL3ST1Q99999 423 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 ANKHQ9HCJ1 492 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 C11orf16Q9NQ32 467 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 MYH1P12882 1939 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 BBIP1A8MTZ0 92 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 SCGNO76038 276 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 UROSP10746 265 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 IGFBP5P24593 272 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 PDHA2P29803 388 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 ARHGDIBP52566 201 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 IL18R1Q13478 541 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 SMCO1Q147U7 214 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 SH3PXD2AQ5TCZ1 1133 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms