RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 ZNF486Q96H40 463 aaPredicted RBP17■□□□□ 0.31
EWSR1-206ENST00000397938 MMP27Q9H306 513 aa17■□□□□ 0.31
EWSR1-206ENST00000397938 GMPPBQ9Y5P6 360 aa17■□□□□ 0.31
EWSR1-206ENST00000397938 METTL15A6NJ78 407 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 FAM20BO75063 409 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 DLGAP3O95886 979 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 BMPR1AP36894 532 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 BRCC3P46736 316 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 NKX2-5P52952 324 aaPredicted RBP16.99■□□□□ 0.31
EWSR1-206ENST00000397938 PCBP2Q15366 365 aaKnown RBP eCLIP16.99■□□□□ 0.312e-87■■■■■ 42
EWSR1-206ENST00000397938 SMN1Q16637 294 aaKnown RBP16.99■□□□□ 0.31
EWSR1-206ENST00000397938 ZNF404Q494X3 552 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 CTSL3PQ5NE16 218 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 ATG9BQ674R7 924 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 CES5AQ6NT32 575 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 Q8N9G6 341 aaPredicted RBP16.99■□□□□ 0.31
EWSR1-206ENST00000397938 IGSF8Q969P0 613 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 PYCR2Q96C36 320 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 APOL4Q9BPW4 351 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 FAM105AQ9NUU6 356 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 EIF3LQ9Y262 564 aaKnown RBP16.99■□□□□ 0.31
EWSR1-206ENST00000397938 PABPN1LA6NDY0 278 aaKnown RBP16.99■□□□□ 0.31
EWSR1-206ENST00000397938 ARL5CA6NH57 179 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 AGAP5A6NIR3 686 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 RGS13O14921 159 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 DYRK3O43781 588 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 PGRP06401 933 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 CD9P21926 228 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 NR4A2P43354 598 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 DAPP51397 102 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 TBX4P57082 545 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 C18orf21Q32NC0 220 aaPredicted RBP16.99■□□□□ 0.31
EWSR1-206ENST00000397938 CARD16Q5EG05 197 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 KDM4DQ6B0I6 523 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 GLB1L3Q8NCI6 653 aaPredicted RBP16.99■□□□□ 0.31
EWSR1-206ENST00000397938 CAPSLQ8WWF8 208 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 POP5Q969H6 163 aaKnown RBP16.99■□□□□ 0.31
EWSR1-206ENST00000397938 TBC1D20Q96BZ9 403 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 YME1L1Q96TA2 773 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 CLSTN3Q9BQT9 956 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 C1orf109Q9NX04 203 aa16.99■□□□□ 0.31
EWSR1-206ENST00000397938 PTTG1O95997 202 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 IL6P05231 212 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 LCKP06239 509 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 SERPINF2P08697 491 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 UGT2B10P36537 528 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 ACVRL1P37023 503 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 SEPHS1P49903 392 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 TUBA1BP68363 451 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 IL1RL1Q01638 556 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 TRAF3Q13114 568 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 GTF2H2Q13888 395 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 LAPTM4AQ15012 233 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 MAD2L1BPQ15013 274 aaPredicted RBP16.98■□□□□ 0.31
EWSR1-206ENST00000397938 PARP15Q460N3 678 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 GTF2H2CQ6P1K8 395 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 TUBA1AQ71U36 451 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 CEP68Q76N32 757 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 ZDHHC21Q8IVQ6 265 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 CLIP4Q8N3C7 705 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 SIGLEC11Q96RL6 698 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 DPY30Q9C005 99 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 ABHD16BQ9H3Z7 469 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 OR1I1O60431 355 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 SPNP16150 400 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 KRT20P35900 424 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 CASP3P42574 277 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 GZMMP51124 257 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 CACNB2Q08289 660 aaPredicted RBP16.98■□□□□ 0.31
EWSR1-206ENST00000397938 FBXL22Q6P050 247 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 C10orf111Q8N326 155 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 OR10Q1Q8NGQ4 319 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 SLC6A13Q9NSD5 602 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 NDRG4Q9ULP0 352 aaKnown RBP16.98■□□□□ 0.31
EWSR1-206ENST00000397938 VPS9D1Q9Y2B5 631 aa16.98■□□□□ 0.31
EWSR1-206ENST00000397938 MOXD2PA6NHM9 499 aa16.97■□□□□ 0.31
EWSR1-206ENST00000397938 ARVCFO00192 962 aa16.97■□□□□ 0.31
EWSR1-206ENST00000397938 PRAMEF11O60813 436 aa16.97■□□□□ 0.31
EWSR1-206ENST00000397938 CLK1P49759 484 aaKnown RBP16.97■□□□□ 0.31
EWSR1-206ENST00000397938 UBE2UQ5VVX9 321 aa16.97■□□□□ 0.31
EWSR1-206ENST00000397938 PSAPL1Q6NUJ1 521 aa16.97■□□□□ 0.31
EWSR1-206ENST00000397938 GLT6D1Q7Z4J2 308 aa16.97■□□□□ 0.31
EWSR1-206ENST00000397938 CIR1Q86X95 450 aaPredicted RBP16.97■□□□□ 0.31
EWSR1-206ENST00000397938 PIANPQ8IYJ0 282 aa16.97■□□□□ 0.31
EWSR1-206ENST00000397938 CHAC2Q8WUX2 184 aa16.97■□□□□ 0.31
EWSR1-206ENST00000397938 SLC38A4Q969I6 547 aa16.97■□□□□ 0.31
EWSR1-206ENST00000397938 FAM120BQ96EK7 910 aaKnown RBP16.97■□□□□ 0.31
EWSR1-206ENST00000397938 PDLIM5Q96HC4 596 aaKnown RBP16.97■□□□□ 0.31
EWSR1-206ENST00000397938 CPPED1Q9BRF8 314 aaPredicted RBP16.97■□□□□ 0.31
EWSR1-206ENST00000397938 CLMPQ9H6B4 373 aa16.97■□□□□ 0.31
EWSR1-206ENST00000397938 ZBTB20Q9HC78 741 aaPredicted RBP16.97■□□□□ 0.31
EWSR1-206ENST00000397938 TNPO3Q9Y5L0 923 aaKnown RBP16.97■□□□□ 0.31
EWSR1-206ENST00000397938 MN1Q10571 1320 aaPredicted RBP16.97■□□□□ 0.31
EWSR1-206ENST00000397938 ILVBLA1L0T0 632 aa16.97■□□□□ 0.31
EWSR1-206ENST00000397938 B3GAT3O94766 335 aa16.97■□□□□ 0.31
EWSR1-206ENST00000397938 OTCP00480 354 aa16.97■□□□□ 0.31
EWSR1-206ENST00000397938 EFNA1P20827 205 aaPredicted RBP16.97■□□□□ 0.31
EWSR1-206ENST00000397938 PSEN2P49810 448 aa16.97■□□□□ 0.31
EWSR1-206ENST00000397938 MAD2L1Q13257 205 aaPredicted RBP16.97■□□□□ 0.31
EWSR1-206ENST00000397938 SNX20Q7Z614 316 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms