RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 RAD51AP1Q96B01 352 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 BIRC7Q96CA5 298 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 FAXDC2Q96IV6 333 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 PTPN18Q99952 460 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 CNPPD1Q9BV87 410 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 CD320Q9NPF0 282 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 SESN1Q9Y6P5 492 aa10.57□□□□□ -0.72
CCDC40-204ENST00000397545 DNAJC25-GNG10A0A024R161 153 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 A0A0G2JN53 185 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 GABRDO14764 452 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 SLC22A2O15244 555 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 C9P02748 559 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 ZNF12P17014 697 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 GM2AP17900 193 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 C4BPBP20851 252 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 PROZP22891 400 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 PPIBP23284 216 aaKnown RBP10.56□□□□□ -0.72
CCDC40-204ENST00000397545 AGTR2P50052 363 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 INCA1Q0VD86 236 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 PAFAH1B3Q15102 231 aaKnown RBP10.56□□□□□ -0.72
CCDC40-204ENST00000397545 CCDC80Q76M96 950 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 ZZZ3Q8IYH5 903 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 CEP295NLQ96MC4 621 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 HAPLN3Q96S86 360 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 WRAP53Q9BUR4 548 aaKnown RBP10.56□□□□□ -0.72
CCDC40-204ENST00000397545 MAGEE1Q9HCI5 957 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 NDOR1Q9UHB4 597 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 CORO2BQ9UQ03 480 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 RPL4P36578 427 aaKnown RBP10.56□□□□□ -0.72
CCDC40-204ENST00000397545 GANABQ14697 944 aaKnown RBP10.56□□□□□ -0.72
CCDC40-204ENST00000397545 KCNA10Q16322 511 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 MYLK3Q32MK0 819 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 SPANXN4Q5MJ08 99 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 CAPN13Q6MZZ7 669 aaPredicted RBP10.56□□□□□ -0.72
CCDC40-204ENST00000397545 OR52L1Q8NGH7 329 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 AURKBQ96GD4 344 aaPredicted RBP10.56□□□□□ -0.72
CCDC40-204ENST00000397545 ZNF607Q96SK3 696 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 FAM83DQ9H4H8 585 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 NSUN3Q9H649 340 aaKnown RBP10.56□□□□□ -0.72
CCDC40-204ENST00000397545 CCSER2Q9H7U1 834 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 SEMA3GQ9NS98 782 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 SNTG1Q9NSN8 517 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 MCUBQ9NWR8 336 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 GIN1Q9NXP7 522 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 ACTR3BQ9P1U1 418 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 HS3ST4Q9Y661 456 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 CPSF4LA6NMK7 179 aaKnown RBP10.56□□□□□ -0.72
CCDC40-204ENST00000397545 SNAP29O95721 258 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 GLUD1P00367 558 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 IFNW1P05000 195 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 CCNYL3P0C7X3 344 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 GNAZP19086 355 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 OGNP20774 298 aaKnown RBP10.56□□□□□ -0.72
CCDC40-204ENST00000397545 SMIM11AP58511 58 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 ABATP80404 500 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 GALNT2Q10471 571 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 LYPLAL1Q5VWZ2 237 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 OR4F3Q6IEY1 312 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 MSANTD2Q6P1R3 559 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 FUT10Q6P4F1 479 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 TNFAIP8L2Q6P589 184 aaPredicted RBP10.56□□□□□ -0.72
CCDC40-204ENST00000397545 TMPRSS11AQ6ZMR5 421 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 ZNF598Q86UK7 904 aaKnown RBP10.56□□□□□ -0.72
CCDC40-204ENST00000397545 FIBCD1Q8N539 461 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 STON2Q8WXE9 905 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 MOCS1Q9NZB8 636 aa10.56□□□□□ -0.72
CCDC40-204ENST00000397545 IQCMA0A1B0GVH7 501 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-204ENST00000397545 ARVCFO00192 962 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 KLHL18O94889 574 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 OR5F1O95221 314 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 CXCR2P25025 360 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 TAS2R41P59536 307 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 FKBP1BP68106 108 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 MZT2AQ6P582 158 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 C14orf80Q86SX3 495 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 LRRC17Q8N6Y2 441 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 SMG8Q8ND04 991 aaKnown RBP10.55□□□□□ -0.72
CCDC40-204ENST00000397545 CXorf40AQ8TE69 158 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 MUS81Q96NY9 551 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 FAIM2Q9BWQ8 316 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 NUSAP1Q9BXS6 441 aaKnown RBP10.55□□□□□ -0.72
CCDC40-204ENST00000397545 TMEM138Q9NPI0 162 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 CRTAC1Q9NQ79 661 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 ITM2CQ9NQX7 267 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 ITGB1BP2Q9UKP3 347 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 MRPS23Q9Y3D9 190 aaKnown RBP10.55□□□□□ -0.72
CCDC40-204ENST00000397545 ST14Q9Y5Y6 855 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 OAS3Q9Y6K5 1087 aaKnown RBP10.55□□□□□ -0.72
CCDC40-204ENST00000397545 RLFQ13129 1914 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 A0A1W2PP18 115 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 FADS2P1A8MWK0 482 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 UGT2B17O75795 530 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 HLA-DQA2P01906 255 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 WASP42768 502 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 STT3AP46977 705 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 EEFSECP57772 596 aaKnown RBP10.55□□□□□ -0.72
CCDC40-204ENST00000397545 PCDH1Q08174 1060 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 HSPB3Q12988 150 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 IL18Q14116 193 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms