RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 ABCE1P61221 599 aaKnown RBP20.65■□□□□ 0.9
CPNE1-204ENST00000397443 SETDB1Q15047 1291 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 UNC50Q53HI1 259 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 TAF8Q7Z7C8 310 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 C11orf74Q86VG3 221 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 LMNTD1Q8N9Z9 388 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 PDPRQ8NCN5 879 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 PIGKQ92643 395 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 PKP4Q99569 1192 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 C11orf16Q9NQ32 467 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 ZSCAN32Q9NX65 697 aa20.65■□□□□ 0.9
CPNE1-204ENST00000397443 MARCOQ9UEW3 520 aaPredicted RBP20.65■□□□□ 0.9
CPNE1-204ENST00000397443 PI4KAP42356 2102 aa20.64■□□□□ 0.89
CPNE1-204ENST00000397443 PRR19A6NJB7 356 aa20.64■□□□□ 0.89
CPNE1-204ENST00000397443 H2AFYO75367 372 aaKnown RBP20.64■□□□□ 0.89
CPNE1-204ENST00000397443 KITP10721 976 aa20.64■□□□□ 0.89
CPNE1-204ENST00000397443 BLKP51451 505 aa20.64■□□□□ 0.89
CPNE1-204ENST00000397443 UAP1L1Q3KQV9 507 aa20.64■□□□□ 0.89
CPNE1-204ENST00000397443 CPLX4Q7Z7G2 160 aa20.64■□□□□ 0.89
CPNE1-204ENST00000397443 OR6Y1Q8NGX8 325 aa20.64■□□□□ 0.89
CPNE1-204ENST00000397443 FERD3LQ96RJ6 166 aa20.64■□□□□ 0.89
CPNE1-204ENST00000397443 NRTNQ99748 197 aa20.64■□□□□ 0.89
CPNE1-204ENST00000397443 HGH1Q9BTY7 390 aa20.64■□□□□ 0.89
CPNE1-204ENST00000397443 ATG10Q9H0Y0 220 aa20.64■□□□□ 0.89
CPNE1-204ENST00000397443 THAP1Q9NVV9 213 aa20.64■□□□□ 0.89
CPNE1-204ENST00000397443 PRAMEF33A0A0G2JMD5 474 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 VILLO15195 856 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 CCNT2O60583 730 aaKnown RBP20.63■□□□□ 0.89
CPNE1-204ENST00000397443 SNNO75324 88 aaPredicted RBP20.63■□□□□ 0.89
CPNE1-204ENST00000397443 RCN2Q14257 317 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 KRT33BQ14525 404 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 ARL13AQ5H913 290 aaPredicted RBP20.63■□□□□ 0.89
CPNE1-204ENST00000397443 SULT1C3Q6IMI6 304 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 CAPRIN2Q6IMN6 1127 aaKnown RBP20.63■□□□□ 0.89
CPNE1-204ENST00000397443 RASGRP3Q8IV61 690 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 PPFIBP2Q8ND30 876 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 PYCR2Q96C36 320 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 L3HYPDHQ96EM0 354 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 TMEM79Q9BSE2 394 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 LRRC61Q9BV99 259 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 SEMA4BQ9NPR2 832 aaPredicted RBP20.63■□□□□ 0.89
CPNE1-204ENST00000397443 PTBP2Q9UKA9 531 aaKnown RBP20.63■□□□□ 0.89
CPNE1-204ENST00000397443 EDF1O60869 148 aaKnown RBP20.63■□□□□ 0.89
CPNE1-204ENST00000397443 SDC3O75056 442 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 SLC16A8O95907 504 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 GNSP15586 552 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 MAPK9P45984 424 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 OCRLQ01968 901 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 TSTA3Q13630 321 aaPredicted RBP20.63■□□□□ 0.89
CPNE1-204ENST00000397443 SIM2Q14190 667 aaPredicted RBP20.63■□□□□ 0.89
CPNE1-204ENST00000397443 FAM219BQ5XKK7 198 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 UNC5DQ6UXZ4 953 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 SKA1Q96BD8 255 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 GSDMCQ9BYG8 508 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 GSTO2Q9H4Y5 243 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 TMCO1Q9UM00 188 aa20.63■□□□□ 0.89
CPNE1-204ENST00000397443 STX16-NPEPL1H3BU86 382 aa20.62■□□□□ 0.89
CPNE1-204ENST00000397443 PPP6CO00743 305 aa20.62■□□□□ 0.89
CPNE1-204ENST00000397443 STX16O14662 325 aa20.62■□□□□ 0.89
CPNE1-204ENST00000397443 CSF2P04141 144 aa20.62■□□□□ 0.89
CPNE1-204ENST00000397443 DRD4P21917 467 aa20.62■□□□□ 0.89
CPNE1-204ENST00000397443 HALP42357 657 aa20.62■□□□□ 0.89
CPNE1-204ENST00000397443 AP1S2P56377 157 aa20.62■□□□□ 0.89
CPNE1-204ENST00000397443 TEAD4Q15561 434 aa20.62■□□□□ 0.89
CPNE1-204ENST00000397443 ZXDCQ2QGD7 858 aaPredicted RBP20.62■□□□□ 0.89
CPNE1-204ENST00000397443 ANKS6Q68DC2 871 aa20.62■□□□□ 0.89
CPNE1-204ENST00000397443 TTC23LQ6PF05 361 aa20.62■□□□□ 0.89
CPNE1-204ENST00000397443 SFTPA2Q8IWL1 248 aa20.62■□□□□ 0.89
CPNE1-204ENST00000397443 OR5K2Q8NHB8 316 aa20.62■□□□□ 0.89
CPNE1-204ENST00000397443 GPBAR1Q8TDU6 330 aa20.62■□□□□ 0.89
CPNE1-204ENST00000397443 TRPC4APQ8TEL6 797 aa20.62■□□□□ 0.89
CPNE1-204ENST00000397443 IL17FQ96PD4 163 aa20.62■□□□□ 0.89
CPNE1-204ENST00000397443 SORT1Q99523 831 aa20.62■□□□□ 0.89
CPNE1-204ENST00000397443 DRC3Q9H069 523 aa20.62■□□□□ 0.89
CPNE1-204ENST00000397443 TAAR2Q9P1P5 351 aa20.62■□□□□ 0.89
CPNE1-204ENST00000397443 WDR87Q6ZQQ6 2873 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 TP53BP1Q12888 1972 aaPredicted RBP20.61■□□□□ 0.89
CPNE1-204ENST00000397443 CACNA1EQ15878 2313 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 A0A1B0GTW7 788 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 TMEM114B3SHH9 223 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 NME1P15531 152 aaKnown RBP20.61■□□□□ 0.89
CPNE1-204ENST00000397443 ARL1P40616 181 aaPredicted RBP20.61■□□□□ 0.89
CPNE1-204ENST00000397443 RPE65Q16518 533 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 FRMD7Q6ZUT3 714 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 DCUN1D3Q8IWE4 304 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 LSMEM2Q8N112 164 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 C2orf73Q8N5S3 287 aaPredicted RBP20.61■□□□□ 0.89
CPNE1-204ENST00000397443 LMX1AQ8TE12 382 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 PATE1Q8WXA2 126 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 NELL1Q92832 810 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 MED8Q96G25 268 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 CCDC138Q96M89 665 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 CCT8L2Q96SF2 557 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 TRIT1Q9H3H1 467 aaKnown RBP20.61■□□□□ 0.89
CPNE1-204ENST00000397443 FSCN3Q9NQT6 498 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 STOX2Q9P2F5 926 aaPredicted RBP20.61■□□□□ 0.89
CPNE1-204ENST00000397443 PILRBQ9UKJ0 227 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 PCTPQ9UKL6 214 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 RPS17P08708 135 aaKnown RBP20.61■□□□□ 0.89
CPNE1-204ENST00000397443 MPSTP25325 297 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms