RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 OR56A4Q8NGH8 313 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 PHF21BQ96EK2 531 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 ZNF514Q96K75 400 aaPredicted RBP14.59□□□□□ -0.07
CAPN3-207ENST00000397200 GPR21Q99679 349 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 PRRX2Q99811 253 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 C1QTNF3Q9BXJ4 246 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 SLC7A8Q9UHI5 535 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 SLC17A4Q9Y2C5 497 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.59□□□□□ -0.07
CAPN3-207ENST00000397200 A0A1W2PR77 199 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 E5RI56 91 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 NUAK1O60285 661 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 GNSP15586 552 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 GCKP35557 465 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 AFF3P51826 1226 aaKnown RBP14.58□□□□□ -0.08
CAPN3-207ENST00000397200 CTSCP53634 463 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 NAA20P61599 178 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 TPRG1LQ5T0D9 272 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 TRAPPC5Q8IUR0 188 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 SLC22A18ASQ8N1D0 253 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 PTGR2Q8N8N7 351 aaPredicted RBP14.58□□□□□ -0.08
CAPN3-207ENST00000397200 GIMAP7Q8NHV1 300 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 STAG3L4Q8TBR4 150 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 CD200R1Q8TD46 325 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 THTPAQ9BU02 230 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 SHCBP1LQ9BZQ2 653 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 RMI1Q9H9A7 625 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 ZBTB26Q9HCK0 441 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 GPR27Q9NS67 375 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 SUSD2Q9UGT4 822 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 MOSPD1Q9UJG1 213 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 IKZF3Q9UKT9 509 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 TMCO1Q9UM00 188 aa14.58□□□□□ -0.08
CAPN3-207ENST00000397200 A0A1B0GTW7 788 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 STX16-NPEPL1H3BU86 382 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 UBXN8O00124 270 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 STX16O14662 325 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 ANP32DO95626 131 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 WNT1P04628 370 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 CEACAM5P06731 702 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 FGF4P08620 206 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 RPS17P08708 135 aaKnown RBP14.57□□□□□ -0.08
CAPN3-207ENST00000397200 THRAP10827 490 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 DPP6P42658 865 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 PRLHRP49683 370 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 ACTR3P61158 418 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 MXRA7P84157 204 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 SLC25A3Q00325 362 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 TEAD4Q15561 434 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 BCL7AQ4VC05 210 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 LAYNQ6UX15 382 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 CYHR1Q6ZMK1 362 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 CEP70Q8NHQ1 597 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 RP9Q8TA86 221 aaKnown RBP14.57□□□□□ -0.08
CAPN3-207ENST00000397200 ANKRD27Q96NW4 1050 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 PANX3Q96QZ0 392 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 SLC30A3Q99726 388 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 FGF22Q9HCT0 170 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 KLQ9UEF7 1012 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 PILRBQ9UKJ0 227 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 GPR34Q9UPC5 381 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 C15orf41Q9Y2V0 281 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 TRAF6Q9Y4K3 522 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 R4GN57 208 aa14.57□□□□□ -0.08
CAPN3-207ENST00000397200 TP53BP1Q12888 1972 aaPredicted RBP14.57□□□□□ -0.08
CAPN3-207ENST00000397200 SDK1Q7Z5N4 2213 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 SPTY2D1-AS1A0A0U1RR47 76 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 PRSS38A1L453 326 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 SYCE1LA8MT33 242 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 IQCF5A8MTL0 148 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 TLR4O00206 839 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 TNFRSF10CO14798 259 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 SGTAO43765 313 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 NIPSNAP2O75323 286 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 TRIM16O95361 564 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 PSMG1O95456 288 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 FTH1P02794 183 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 CHRM3P20309 590 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 C21orf59P57076 290 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 UGT3A2Q3SY77 523 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 CRTC3Q6UUV7 619 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 RAB44Q7Z6P3 723 aaPredicted RBP14.56□□□□□ -0.08
CAPN3-207ENST00000397200 LRRTM4Q86VH4 590 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 GALNT13Q8IUC8 556 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 SYT12Q8IV01 421 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 BEND7Q8N7W2 519 aaPredicted RBP14.56□□□□□ -0.08
CAPN3-207ENST00000397200 PIGKQ92643 395 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 PDLIM5Q96HC4 596 aaKnown RBP14.56□□□□□ -0.08
CAPN3-207ENST00000397200 CLPTM1LQ96KA5 538 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 MRPL40Q9NQ50 206 aaKnown RBP14.56□□□□□ -0.08
CAPN3-207ENST00000397200 GALPQ9UBC7 116 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 ZNHIT2Q9UHR6 403 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 TRMT6Q9UJA5 497 aaKnown RBP14.56□□□□□ -0.08
CAPN3-207ENST00000397200 RAB23Q9ULC3 237 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 COPG1Q9Y678 874 aaKnown RBP14.56□□□□□ -0.08
CAPN3-207ENST00000397200 LRP4O75096 1905 aa14.56□□□□□ -0.08
CAPN3-207ENST00000397200 VILLO15195 856 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 KMOO15229 486 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 CIB2O75838 187 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 SUPT7LO94864 414 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms