RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 RAB23Q9ULC3 237 aa13.72□□□□□ -0.21
GAPDH-203ENST00000396858 TDRKHQ9Y2W6 561 aaKnown RBP13.72□□□□□ -0.21
GAPDH-203ENST00000396858 TMEM131Q92545 1883 aa13.72□□□□□ -0.21
GAPDH-203ENST00000396858 TRBV23OR9-2A0A075B6M9 112 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 MYO1CO00159 1063 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 KLK8O60259 260 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 RPN2P04844 631 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 SERPINE1P05121 402 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 ANXA5P08758 320 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 HIST1H2AGP0C0S8 130 aaPredicted RBP13.71□□□□□ -0.21
GAPDH-203ENST00000396858 HIST1H2ADP20671 130 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 EPHA8P29322 1005 aaPredicted RBP13.71□□□□□ -0.21
GAPDH-203ENST00000396858 CCR10P46092 362 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 HSPA7P48741 367 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 RPIAP49247 311 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 PRKAA2P54646 552 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 ALDH18A1P54886 795 aaKnown RBP13.71□□□□□ -0.21
GAPDH-203ENST00000396858 AP1S2P56377 157 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 CDKL1Q00532 357 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 TCF15Q12870 199 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 PRKG2Q13237 762 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 GRB7Q14451 532 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 SHBQ15464 509 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 DEFB133Q30KQ1 61 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 TCEAL6Q6IPX3 200 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 ABRAXAS1Q6UWZ7 409 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 WASH2PQ6VEQ5 465 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 RAB44Q7Z6P3 723 aaPredicted RBP13.71□□□□□ -0.21
GAPDH-203ENST00000396858 GKN2Q86XP6 184 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 SLC22A9Q8IVM8 553 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 CCNYL1Q8N7R7 359 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 LMNTD1Q8N9Z9 388 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 OR2I1PQ8NGU4 316 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 CEP76Q8TAP6 659 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 MCOLN3Q8TDD5 553 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 LRRC8CQ8TDW0 803 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 SLC37A2Q8TED4 501 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 ZDHHC1Q8WTX9 485 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 UBTD2Q8WUN7 234 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 JPH3Q8WXH2 748 aaPredicted RBP13.71□□□□□ -0.21
GAPDH-203ENST00000396858 TCEAL3Q969E4 200 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 ESAMQ96AP7 390 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 RHBDF1Q96CC6 855 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 CXorf40BQ96DE9 158 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 HIST1H2AHQ96KK5 128 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 FERD3LQ96RJ6 166 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 HIST1H2AJQ99878 128 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 H2AFJQ9BTM1 129 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 GATA5Q9BWX5 397 aaPredicted RBP13.71□□□□□ -0.21
GAPDH-203ENST00000396858 TRIM54Q9BYV2 358 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 ARRDC1-AS1Q9H2J1 176 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 ERVMER34-1Q9H9K5 563 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 IL21RQ9HBE5 538 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 WASH6PQ9NQA3 447 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 STOX2Q9P2F5 926 aaPredicted RBP13.71□□□□□ -0.21
GAPDH-203ENST00000396858 PCOLCE2Q9UKZ9 415 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 DOLKQ9UPQ8 538 aa13.71□□□□□ -0.21
GAPDH-203ENST00000396858 STX16-NPEPL1H3BU86 382 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 STX16O14662 325 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 TAPBPO15533 448 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 TRIM13O60858 407 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 LYPLA1O75608 230 aaPredicted RBP13.7□□□□□ -0.22
GAPDH-203ENST00000396858 SLC16A8O95907 504 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 RPS17P08708 135 aaKnown RBP13.7□□□□□ -0.22
GAPDH-203ENST00000396858 IMPA1P29218 277 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 ARRB1P49407 418 aaPredicted RBP13.7□□□□□ -0.22
GAPDH-203ENST00000396858 MAZP56270 477 aaKnown RBP13.7□□□□□ -0.22
GAPDH-203ENST00000396858 DNAJB13P59910 316 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 HERVK_113P63132 956 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 BST1Q10588 318 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 KRT33BQ14525 404 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 ZNF423Q2M1K9 1284 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 ZNF678Q5SXM1 525 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 TRIM48Q8IWZ4 208 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 TBC1D21Q8IYX1 336 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 NAGSQ8N159 534 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 FBXO15Q8NCQ5 510 aaPredicted RBP13.7□□□□□ -0.22
GAPDH-203ENST00000396858 PPFIBP2Q8ND30 876 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 FAM46DQ8NEK8 389 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 SREK1Q8WXA9 508 aaKnown RBP13.7□□□□□ -0.22
GAPDH-203ENST00000396858 FBXL8Q96CD0 374 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 CCDC126Q96EE4 140 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 MAGEB18Q96M61 343 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 NSUN5Q96P11 429 aaKnown RBP13.7□□□□□ -0.22
GAPDH-203ENST00000396858 ERVK-6Q9BXR3 956 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 CAPS2Q9BXY5 557 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 ZNF624Q9P2J8 865 aaPredicted RBP13.7□□□□□ -0.22
GAPDH-203ENST00000396858 GMEB2Q9UKD1 530 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 TMCO1Q9UM00 188 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 SLC6A14Q9UN76 642 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 HEBP2Q9Y5Z4 205 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 CUL9Q8IWT3 2517 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 CACNA1EQ15878 2313 aa13.7□□□□□ -0.22
GAPDH-203ENST00000396858 GPR179Q6PRD1 2367 aa13.69□□□□□ -0.22
GAPDH-203ENST00000396858 USP34Q70CQ2 3546 aa13.69□□□□□ -0.22
GAPDH-203ENST00000396858 A0A1B0GTQ1 180 aa13.69□□□□□ -0.22
GAPDH-203ENST00000396858 LMO7DNF2Z398 122 aa13.69□□□□□ -0.22
GAPDH-203ENST00000396858 CCNT2O60583 730 aaKnown RBP13.69□□□□□ -0.22
GAPDH-203ENST00000396858 H2AFYO75367 372 aaKnown RBP13.69□□□□□ -0.22
GAPDH-203ENST00000396858 ANXA6P08133 673 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms