RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 KIAA0319LQ8IZA0 1049 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 OXR1Q8N573 874 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 ARFGAP1Q8N6T3 406 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 RHOXF1Q8NHV9 184 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 TFAP2BQ92481 460 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 EMID1Q96A84 441 aaPredicted RBP8.28□□□□□ -1.08
NDE1-202ENST00000396355 AHCYL2Q96HN2 611 aaKnown RBP8.28□□□□□ -1.08
NDE1-202ENST00000396355 CGRRF1Q99675 332 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 C20orf27Q9GZN8 174 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 FAM49AQ9H0Q0 323 aaPredicted RBP8.28□□□□□ -1.08
NDE1-202ENST00000396355 CERS4Q9HA82 394 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 ZBTB20Q9HC78 741 aaPredicted RBP8.28□□□□□ -1.08
NDE1-202ENST00000396355 MCUBQ9NWR8 336 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 BFARQ9NZS9 450 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 COMMD3Q9UBI1 195 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 ACTL7AQ9Y615 435 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 PTTG1O95997 202 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 CD63P08962 238 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 AKR1A1P14550 325 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 ZNF26P17031 533 aaPredicted RBP8.27□□□□□ -1.08
NDE1-202ENST00000396355 C4BPBP20851 252 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 HSD17B7P56937 341 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 NRG1Q02297 640 aaPredicted RBP8.27□□□□□ -1.08
NDE1-202ENST00000396355 BST2Q10589 180 aaKnown RBP8.27□□□□□ -1.08
NDE1-202ENST00000396355 CLINT1Q14677 625 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 GRTP1Q5TC63 336 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 FAM180BQ6P0A1 224 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 XRRA1Q6P2D8 792 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 UNC5DQ6UXZ4 953 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 CATSPERGQ6ZRH7 1159 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 BBS12Q6ZW61 710 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 RIOX2Q8IUF8 465 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 ZNF557Q8N988 423 aaPredicted RBP8.27□□□□□ -1.08
NDE1-202ENST00000396355 MARC2Q969Z3 335 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 ASB9Q96DX5 294 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 ANKRD60Q9BZ19 345 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 PRDM12Q9H4Q4 367 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 SLC39A1Q9NY26 324 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 UBQLN2Q9UHD9 624 aa8.27□□□□□ -1.08
NDE1-202ENST00000396355 CLUHO75153 1309 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 MCM3APO60318 1980 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 C3orf70A6NLC5 250 aaPredicted RBP8.27□□□□□ -1.09
NDE1-202ENST00000396355 M0R233 179 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 LGALS8O00214 317 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 KPNA3O00505 521 aaPredicted RBP8.27□□□□□ -1.09
NDE1-202ENST00000396355 OIP5O43482 229 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 ULK1O75385 1050 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 CDRT1O95170 752 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 IL18RAPO95256 599 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 FABP1P07148 127 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 CD48P09326 243 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 GABRB2P47870 512 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 CCL23P55773 120 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 SMAD4Q13485 552 aaKnown RBP8.27□□□□□ -1.09
NDE1-202ENST00000396355 TSC22D1Q15714 1073 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 ZNF181Q2M3W8 571 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 C9orf50Q5SZB4 431 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 NXNL2Q5VZ03 156 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 LIX1Q8N485 282 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 RNF149Q8NC42 400 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 OR10T2Q8NGX3 314 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 STON2Q8WXE9 905 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 TFAP2CQ92754 450 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 APBB2Q92870 758 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 TIFAQ96CG3 184 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 SLC30A2Q9BRI3 323 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 CRISPLD2Q9H0B8 497 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 BCKDKO14874 412 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 KPNA6O60684 536 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 TMEM63AO94886 807 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 SLC25A27O95847 323 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 MAGEA2P43356 314 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 SOX9P48436 509 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 MLLT10P55197 1068 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 GRM3Q14832 879 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 NHSL2Q5HYW2 709 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 SLC39A5Q6ZMH5 540 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 GDPD3Q7L5L3 318 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 DEFB128Q7Z7B8 93 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 PCSK9Q8NBP7 692 aaKnown RBP8.27□□□□□ -1.09
NDE1-202ENST00000396355 OR6Q1Q8NGQ2 317 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 PMM1Q92871 262 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 RNF34Q969K3 372 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 ZNF566Q969W8 418 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 OTUB1Q96FW1 271 aaPredicted RBP8.27□□□□□ -1.09
NDE1-202ENST00000396355 MS4A7Q9GZW8 240 aaPredicted RBP8.27□□□□□ -1.09
NDE1-202ENST00000396355 SLC6A17Q9H1V8 727 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 ENOPH1Q9UHY7 261 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 MAB21L2Q9Y586 359 aa8.27□□□□□ -1.09
NDE1-202ENST00000396355 PCDHGA9Q9Y5G4 932 aaKnown RBP8.27□□□□□ -1.09
NDE1-202ENST00000396355 hCG_1818297A0A087WSY0 165 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 E9PI62 339 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 CTDSP2O14595 271 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 KPNA5O15131 536 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 SSX4O60224 188 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 NDUFS6O75380 124 aaKnown RBP8.26□□□□□ -1.09
NDE1-202ENST00000396355 CHRNA1P02708 482 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 HEXBP07686 556 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 CSH1P0DML2 217 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 CSH2P0DML3 217 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms