RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 ELOCQ15369 112 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 CAPRIN2Q6IMN6 1127 aaKnown RBP13.34□□□□□ -0.27
VAPB-202ENST00000395802 C6orf89Q6UWU4 347 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 CEP68Q76N32 757 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 SPATA21Q7Z572 469 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 WDR75Q8IWA0 830 aaKnown RBP13.34□□□□□ -0.27
VAPB-202ENST00000395802 C1orf216Q8TAB5 229 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 UBTD2Q8WUN7 234 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 ZC3H10Q96K80 434 aaKnown RBP13.34□□□□□ -0.27
VAPB-202ENST00000395802 WWP1Q9H0M0 922 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 MVB12BQ9H7P6 319 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 PRR19A6NJB7 356 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 ARHGEF33A8MVX0 844 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 SLCO1B7G3V0H7 640 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 STK16O75716 305 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 CSF2P04141 144 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 NME1P15531 152 aaKnown RBP13.34□□□□□ -0.27
VAPB-202ENST00000395802 HNRNPKP61978 463 aaKnown RBP eCLIP13.34□□□□□ -0.27
VAPB-202ENST00000395802 OCRLQ01968 901 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 SF3A3Q12874 501 aaKnown RBP eCLIP13.34□□□□□ -0.27
VAPB-202ENST00000395802 LCP2Q13094 533 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 TPRG1LQ5T0D9 272 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 ABRAXAS1Q6UWZ7 409 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 FRMD7Q6ZUT3 714 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 PHACTR4Q8IZ21 702 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 AVL9Q8NBF6 648 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 OR9A1PQ8NGU1 263 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 PIWIL2Q8TC59 973 aaKnown RBP13.34□□□□□ -0.27
VAPB-202ENST00000395802 GPBAR1Q8TDU6 330 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 DLG3Q92796 817 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 NELL1Q92832 810 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 FBXL8Q96CD0 374 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 C12orf66Q96MD2 445 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 RAB11FIP5Q9BXF6 653 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 TRIM55Q9BYV6 548 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 CD244Q9BZW8 370 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 ZDHHC5Q9C0B5 715 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 TMEM168Q9H0V1 697 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 DNAJC28Q9NX36 388 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 OPTCQ9UBM4 332 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 APOBEC3BQ9UH17 382 aaKnown RBP13.34□□□□□ -0.27
VAPB-202ENST00000395802 RAP2CQ9Y3L5 183 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 ANGPTL3Q9Y5C1 460 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 PCDHGA2Q9Y5H1 932 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 A0A0C4DFX4 3053 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 MYO1CO00159 1063 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 RPS17P08708 135 aaKnown RBP13.33□□□□□ -0.28
VAPB-202ENST00000395802 JUNDP17535 347 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 CCND1P24385 295 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 HNRNPH2P55795 449 aaKnown RBP13.33□□□□□ -0.28
VAPB-202ENST00000395802 NXPH1P58417 271 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 CLCQ05315 142 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 EIF2B5Q13144 721 aaKnown RBP13.33□□□□□ -0.28
VAPB-202ENST00000395802 ARHGAP19Q14CB8 494 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 PLK5Q496M5 336 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 ARL13AQ5H913 290 aaPredicted RBP13.33□□□□□ -0.28
VAPB-202ENST00000395802 ARMCX6Q7L4S7 300 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 LRRC70Q7Z2Q7 622 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 SPATS2Q86XZ4 545 aaKnown RBP13.33□□□□□ -0.28
VAPB-202ENST00000395802 SPNS2Q8IVW8 549 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 CHCHD4Q8N4Q1 142 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 ANKS4BQ8N8V4 417 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 FAR2Q96K12 515 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 MAGEB10Q96LZ2 347 aaPredicted RBP13.33□□□□□ -0.28
VAPB-202ENST00000395802 SLC32A1Q9H598 525 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 ERVMER34-1Q9H9K5 563 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 SPASTQ9UBP0 616 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 PSMD13Q9UNM6 376 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 ANKRD12Q6UB98 2062 aa13.33□□□□□ -0.28
VAPB-202ENST00000395802 K7EPI3 171 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 F3P13726 295 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 EPB42P16452 691 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 ITPKAP23677 461 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 UNC50Q53HI1 259 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 SLC30A9Q6PML9 568 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 GKN2Q86XP6 184 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 CEP76Q8TAP6 659 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 ZFPM2Q8WW38 1151 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 RMDN2Q96LZ7 410 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 FERD3LQ96RJ6 166 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 C20orf27Q9GZN8 174 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 IMP3Q9NV31 184 aaKnown RBP13.32□□□□□ -0.28
VAPB-202ENST00000395802 SPATA7Q9P0W8 599 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 CEP192Q8TEP8 1941 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 ABCA7Q8IZY2 2146 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 TNFRSF10AO00220 468 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 E2F3O00716 465 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 SIX3O95343 332 aaPredicted RBP13.32□□□□□ -0.28
VAPB-202ENST00000395802 OTCP00480 354 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 WNT1P04628 370 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 ARRB1P49407 418 aaPredicted RBP13.32□□□□□ -0.28
VAPB-202ENST00000395802 RPL14P50914 215 aaKnown RBP13.32□□□□□ -0.28
VAPB-202ENST00000395802 ANGPT1Q15389 498 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.32□□□□□ -0.28
VAPB-202ENST00000395802 XKR5Q6UX68 686 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 TAF8Q7Z7C8 310 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 SYT12Q8IV01 421 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 ZBTB44Q8NCP5 570 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 SPDYE1Q8NFV5 336 aaPredicted RBP13.32□□□□□ -0.28
VAPB-202ENST00000395802 ZNF483Q8TF39 744 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms