RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 PBX1P40424 430 aa15.25■□□□□ 0.03
SNCA-205ENST00000394991 TMPRSS15P98073 1019 aa15.25■□□□□ 0.03
SNCA-205ENST00000394991 BOP1Q14137 746 aaKnown RBP15.25■□□□□ 0.03
SNCA-205ENST00000394991 ZXDCQ2QGD7 858 aaPredicted RBP15.25■□□□□ 0.03
SNCA-205ENST00000394991 B3GNTL1Q67FW5 361 aaPredicted RBP15.25■□□□□ 0.03
SNCA-205ENST00000394991 H2AFVQ71UI9 128 aa15.25■□□□□ 0.03
SNCA-205ENST00000394991 ZNF567Q8N184 647 aa15.25■□□□□ 0.03
SNCA-205ENST00000394991 TFB1MQ8WVM0 346 aaKnown RBP15.25■□□□□ 0.03
SNCA-205ENST00000394991 ITLN2Q8WWU7 325 aaPredicted RBP15.25■□□□□ 0.03
SNCA-205ENST00000394991 RNF25Q96BH1 459 aaPredicted RBP15.25■□□□□ 0.03
SNCA-205ENST00000394991 LURAP1Q96LR2 239 aa15.25■□□□□ 0.03
SNCA-205ENST00000394991 OR2A14Q96R47 310 aa15.25■□□□□ 0.03
SNCA-205ENST00000394991 MVB12BQ9H7P6 319 aa15.25■□□□□ 0.03
SNCA-205ENST00000394991 TXLNGQ9NUQ3 528 aa15.25■□□□□ 0.03
SNCA-205ENST00000394991 SPHK1Q9NYA1 384 aa15.25■□□□□ 0.03
SNCA-205ENST00000394991 ZFHX3Q15911 3703 aa15.25■□□□□ 0.03
SNCA-205ENST00000394991 NF1P21359 2839 aa15.25■□□□□ 0.03
SNCA-205ENST00000394991 C17orf113A0A1B0GUU1 675 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 MMP11P24347 488 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 TNNT3P45378 269 aaPredicted RBP15.24■□□□□ 0.03
SNCA-205ENST00000394991 GCGRP47871 477 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 KCNK10P57789 538 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 ZBED6P86452 979 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 OTUD4Q01804 1114 aaKnown RBP15.24■□□□□ 0.03
SNCA-205ENST00000394991 ART3Q13508 389 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 AGAP7PQ5VUJ5 663 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 MFSD7Q6UXD7 560 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 COG1Q8WTW3 980 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 CPLX3Q8WVH0 158 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 CTNNBL1Q8WYA6 563 aaPredicted RBP15.24■□□□□ 0.03
SNCA-205ENST00000394991 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.24■□□□□ 0.03
SNCA-205ENST00000394991 RELTQ969Z4 430 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 DCUN1D1Q96GG9 259 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 AGAP4Q96P64 663 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 CHRNA10Q9GZZ6 450 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 FAM96AQ9H5X1 160 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 RUBCNLQ9H714 662 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 KLHL8Q9P2G9 620 aaPredicted RBP15.24■□□□□ 0.03
SNCA-205ENST00000394991 LCMT1Q9UIC8 334 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 CRLS1Q9UJA2 301 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 HS3ST3B1Q9Y662 390 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 CPAMD8Q8IZJ3 1885 aa15.24■□□□□ 0.03
SNCA-205ENST00000394991 NCOA6Q14686 2063 aaPredicted RBP15.24■□□□□ 0.03
SNCA-205ENST00000394991 IFRD1O00458 451 aaPredicted RBP15.23■□□□□ 0.03
SNCA-205ENST00000394991 JRKO75564 520 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 AGTP01019 485 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 CD151P48509 253 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 TDGF1P3P51864 188 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 TPM4P67936 248 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 MPP3Q13368 585 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 TLR1Q15399 786 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 TAF1AQ15573 450 aaPredicted RBP15.23■□□□□ 0.03
SNCA-205ENST00000394991 SKOR2Q2VWA4 1001 aaPredicted RBP15.23■□□□□ 0.03
SNCA-205ENST00000394991 ZNF324BQ6AW86 544 aaPredicted RBP15.23■□□□□ 0.03
SNCA-205ENST00000394991 FAM180AQ6UWF9 173 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 UNC5AQ6ZN44 842 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 GDF7Q7Z4P5 450 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 HOOK3Q86VS8 718 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 PARP9Q8IXQ6 854 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 NXPE1Q8N323 547 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 DNAJC22Q8N4W6 341 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 CATSPER1Q8NEC5 780 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 OR13C4Q8NGS5 318 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 TFGQ92734 400 aaPredicted RBP15.23■□□□□ 0.03
SNCA-205ENST00000394991 SPSB2Q99619 263 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 GORASP1Q9BQQ3 440 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 TRIM56Q9BRZ2 755 aaKnown RBP15.23■□□□□ 0.03
SNCA-205ENST00000394991 FICDQ9BVA6 458 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 OLAHQ9NV23 265 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 CDC23Q9UJX2 597 aa15.23■□□□□ 0.03
SNCA-205ENST00000394991 KLF2Q9Y5W3 355 aaPredicted RBP15.23■□□□□ 0.03
SNCA-205ENST00000394991 A0A0J9YY10 115 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 SERPINC1P01008 464 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 SNRPB2P08579 225 aaKnown RBP15.22■□□□□ 0.03
SNCA-205ENST00000394991 CHRM5P08912 532 aaPredicted RBP15.22■□□□□ 0.03
SNCA-205ENST00000394991 TPBGLP0DKB5 382 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 RALBP11234 206 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 ATP1B2P14415 290 aaPredicted RBP15.22■□□□□ 0.03
SNCA-205ENST00000394991 Q0VFX4 171 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 OLIG2Q13516 323 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 IQCB1Q15051 598 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 TLDC1Q6P9B6 456 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 KIRREL2Q6UWL6 708 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 COX15Q7KZN9 410 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 PID1Q7Z2X4 250 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 LUZP1Q86V48 1076 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 BCORP1Q8N888 145 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 OR5AR1Q8NGP9 310 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 FKBP10Q96AY3 582 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 NACC2Q96BF6 587 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 COPS8Q99627 209 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 MESP1Q9BRJ9 268 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 NDC1Q9BTX1 674 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 FSD1LQ9BXM9 530 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 LHPPQ9H008 270 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 EPS8L2Q9H6S3 715 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 IRAK4Q9NWZ3 460 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 CAPN11Q9UMQ6 739 aa15.22■□□□□ 0.03
SNCA-205ENST00000394991 IGLV3-16A0A075B6K0 115 aa15.21■□□□□ 0.03
SNCA-205ENST00000394991 C2orf81A6NN90 581 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms