RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 FAM155BO75949 473 aa19.33■□□□□ 0.68
SNCA-203ENST00000394986 C1orf105O95561 183 aa19.33■□□□□ 0.68
SNCA-203ENST00000394986 FDXRP22570 491 aa19.33■□□□□ 0.68
SNCA-203ENST00000394986 ETV5P41161 510 aa19.33■□□□□ 0.68
SNCA-203ENST00000394986 TRA2AQ13595 282 aaKnown RBP eCLIP19.33■□□□□ 0.68
SNCA-203ENST00000394986 RTP5Q14D33 572 aa19.33■□□□□ 0.68
SNCA-203ENST00000394986 FAM45BPQ6NSW5 357 aa19.33■□□□□ 0.68
SNCA-203ENST00000394986 KLHL35Q6PF15 583 aa19.33■□□□□ 0.68
SNCA-203ENST00000394986 FBXO38Q6PIJ6 1188 aa19.33■□□□□ 0.68
SNCA-203ENST00000394986 PAQR3Q6TCH7 311 aa19.33■□□□□ 0.68
SNCA-203ENST00000394986 CYS1Q717R9 158 aa19.33■□□□□ 0.68
SNCA-203ENST00000394986 ARHGAP22Q7Z5H3 698 aa19.33■□□□□ 0.68
SNCA-203ENST00000394986 FBXO39Q8N4B4 442 aa19.33■□□□□ 0.68
SNCA-203ENST00000394986 FAM45AQ8TCE6 357 aa19.33■□□□□ 0.68
SNCA-203ENST00000394986 VPS39Q96JC1 886 aa19.33■□□□□ 0.68
SNCA-203ENST00000394986 RHOJQ9H4E5 214 aa19.33■□□□□ 0.68
SNCA-203ENST00000394986 EPHA6Q9UF33 1036 aa19.33■□□□□ 0.68
SNCA-203ENST00000394986 PISDQ9UG56 409 aa19.33■□□□□ 0.68
SNCA-203ENST00000394986 CORO1CQ9ULV4 474 aaPredicted RBP19.33■□□□□ 0.68
SNCA-203ENST00000394986 MTO1Q9Y2Z2 717 aaKnown RBP19.33■□□□□ 0.68
SNCA-203ENST00000394986 VWA7Q9Y334 891 aa19.33■□□□□ 0.68
SNCA-203ENST00000394986 KNTC1P50748 2209 aa19.32■□□□□ 0.68
SNCA-203ENST00000394986 HGSO14964 777 aaPredicted RBP19.32■□□□□ 0.68
SNCA-203ENST00000394986 SPAG6O75602 509 aa19.32■□□□□ 0.68
SNCA-203ENST00000394986 MATN4O95460 622 aa19.32■□□□□ 0.68
SNCA-203ENST00000394986 ACSL3O95573 720 aa19.32■□□□□ 0.68
SNCA-203ENST00000394986 CCL4P13236 92 aa19.32■□□□□ 0.68
SNCA-203ENST00000394986 LSSP48449 732 aa19.32■□□□□ 0.68
SNCA-203ENST00000394986 SEPHS1P49903 392 aa19.32■□□□□ 0.68
SNCA-203ENST00000394986 PDAP1Q13442 181 aaKnown RBP19.32■□□□□ 0.68
SNCA-203ENST00000394986 ZNF460Q14592 562 aa19.32■□□□□ 0.68
SNCA-203ENST00000394986 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.32■□□□□ 0.68
SNCA-203ENST00000394986 ARMC6Q6NXE6 501 aa19.32■□□□□ 0.68
SNCA-203ENST00000394986 CEP128Q6ZU80 1094 aa19.32■□□□□ 0.68
SNCA-203ENST00000394986 RELL1Q8IUW5 271 aa19.32■□□□□ 0.68
SNCA-203ENST00000394986 ADGRF3Q8IZF5 1079 aa19.32■□□□□ 0.68
SNCA-203ENST00000394986 C2orf73Q8N5S3 287 aaPredicted RBP19.32■□□□□ 0.68
SNCA-203ENST00000394986 EEF1AKMT1Q8WVE0 214 aa19.32■□□□□ 0.68
SNCA-203ENST00000394986 MRRFQ96E11 262 aaKnown RBP19.32■□□□□ 0.68
SNCA-203ENST00000394986 ZDHHC12Q96GR4 267 aa19.32■□□□□ 0.68
SNCA-203ENST00000394986 FOPNLQ96NB1 174 aa19.32■□□□□ 0.68
SNCA-203ENST00000394986 MAP3K3Q99759 626 aa19.32■□□□□ 0.68
SNCA-203ENST00000394986 CMKLR1Q99788 373 aa19.32■□□□□ 0.68
SNCA-203ENST00000394986 RAB33BQ9H082 229 aa19.32■□□□□ 0.68
SNCA-203ENST00000394986 IGF2RP11717 2491 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 ARHGEF33A8MVX0 844 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 RPN2P04844 631 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 FAM153BP0C7A2 387 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 JMJD7P0C870 316 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 MYBL2P10244 700 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 PKLRP30613 574 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 CSTF2P33240 577 aaKnown RBP eCLIP19.31■□□□□ 0.68
SNCA-203ENST00000394986 SHMT2P34897 504 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 KPNA2P52292 529 aaKnown RBP19.31■□□□□ 0.68
SNCA-203ENST00000394986 FAM153CQ494X1 144 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 CACHD1Q5VU97 1274 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 UGT3A1Q6NUS8 523 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 CYHR1Q6ZMK1 362 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 CNTNAP3BQ96NU0 1288 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 CPNE1Q99829 537 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 MENTQ9BUN1 341 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 CNTNAP3Q9BZ76 1288 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 TSPYL1Q9H0U9 437 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 OCIAD1Q9NX40 245 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 SPHK1Q9NYA1 384 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 TXNDC16Q9P2K2 825 aa19.31■□□□□ 0.68
SNCA-203ENST00000394986 IGHV5-51A0A0C4DH38 117 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 EFCAB7A8K855 629 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 TNFSF15O95150 251 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 MPC1LP0DKB6 136 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 ENO3P13929 434 aaPredicted RBP19.3■□□□□ 0.68
SNCA-203ENST00000394986 GP5P40197 560 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 MAPK10P53779 464 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 TAS2R39P59534 338 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 PRKAA1Q13131 559 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 EIF3IQ13347 325 aaKnown RBP19.3■□□□□ 0.68
SNCA-203ENST00000394986 NEK10Q6ZWH5 1172 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 PRSS42Q7Z5A4 293 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 TAX1BP1Q86VP1 789 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 FAM129CQ86XR2 697 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 LINC01555Q8NAE3 123 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 AGBL5Q8NDL9 886 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 UHMK1Q8TAS1 419 aaKnown RBP19.3■□□□□ 0.68
SNCA-203ENST00000394986 PMEPA1Q969W9 287 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 LINGO1Q96FE5 620 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 RBBP8Q99708 897 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 CCDC86Q9H6F5 360 aaKnown RBP19.3■□□□□ 0.68
SNCA-203ENST00000394986 CAB39LQ9H9S4 337 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 ACTR10Q9NZ32 417 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 POMT2Q9UKY4 750 aa19.3■□□□□ 0.68
SNCA-203ENST00000394986 PSIP1O75475 530 aaKnown RBP19.29■□□□□ 0.68
SNCA-203ENST00000394986 SLU7O95391 586 aaKnown RBP19.29■□□□□ 0.68
SNCA-203ENST00000394986 TSPAN12O95859 305 aa19.29■□□□□ 0.68
SNCA-203ENST00000394986 CAPNS1P04632 268 aa19.29■□□□□ 0.68
SNCA-203ENST00000394986 CHRM5P08912 532 aaPredicted RBP19.29■□□□□ 0.68
SNCA-203ENST00000394986 ANKRD34CP0C6C1 535 aa19.29■□□□□ 0.68
SNCA-203ENST00000394986 CBSLP0DN79 551 aa19.29■□□□□ 0.68
SNCA-203ENST00000394986 FGF3P11487 239 aaPredicted RBP19.29■□□□□ 0.68
SNCA-203ENST00000394986 CD9P21926 228 aa19.29■□□□□ 0.68
SNCA-203ENST00000394986 PEBP1P30086 187 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms