RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 UBE2UQ5VVX9 321 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 DENND5AQ6IQ26 1287 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 ANKFN1Q8N957 763 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 TTC29Q8NA56 475 aaPredicted RBP12.97□□□□□ -0.33
NFKB1-202ENST00000394820 IL12RB2Q99665 862 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 APOL4Q9BPW4 351 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 TRIM54Q9BYV2 358 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 SMOC2Q9H3U7 446 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 INTS10Q9NVR2 710 aaKnown RBP12.97□□□□□ -0.33
NFKB1-202ENST00000394820 GMEB1Q9Y692 573 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 PLXNA1Q9UIW2 1896 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 RGS10O43665 173 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 ABCB7O75027 752 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 RAPSNQ13702 412 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 RFTN1Q14699 578 aaPredicted RBP12.97□□□□□ -0.33
NFKB1-202ENST00000394820 CYBRD1Q53TN4 286 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 DGKKQ5KSL6 1271 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 SPATC1Q76KD6 591 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 EFL1Q7Z2Z2 1120 aaKnown RBP12.97□□□□□ -0.33
NFKB1-202ENST00000394820 RNF175Q8N4F7 328 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 AGPAT4Q9NRZ5 378 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 VAPAQ9P0L0 249 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 CD84Q9UIB8 345 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 SLC7A4O43246 635 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 RGS14O43566 566 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 PQBP1O60828 265 aaKnown RBP12.96□□□□□ -0.33
NFKB1-202ENST00000394820 TNFRSF21O75509 655 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 APOL3O95236 402 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 MT-ND2P03891 347 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 UROSP10746 265 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 PIGAP37287 484 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 OR1E2P47887 323 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 ALDH9A1P49189 494 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 ALDH3A2P51648 485 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 PSAPL1Q6NUJ1 521 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 ZNF549Q6P9A3 640 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 BLOC1S3Q6QNY0 202 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 KIAA0408Q6ZU52 694 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 SLC24A5Q71RS6 500 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 RTN4RL1Q86UN2 441 aaPredicted RBP12.96□□□□□ -0.33
NFKB1-202ENST00000394820 TRIM48Q8IWZ4 208 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 DTX3Q8N9I9 347 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 MYEOVQ96EZ4 313 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 SCLYQ96I15 445 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 IL4I1Q96RQ9 567 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 ACAT2Q9BWD1 397 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 RBM38Q9H0Z9 239 aaKnown RBP12.96□□□□□ -0.33
NFKB1-202ENST00000394820 DCSTAMPQ9H295 470 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 FBXO44Q9H4M3 255 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 PRDM16Q9HAZ2 1276 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 CSNK1G1Q9HCP0 422 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 TRPV5Q9NQA5 729 aa12.96□□□□□ -0.33
NFKB1-202ENST00000394820 LOC110117498-PIK3R3F6TDL0 507 aa12.96□□□□□ -0.34
NFKB1-202ENST00000394820 CKBP12277 381 aa12.96□□□□□ -0.34
NFKB1-202ENST00000394820 OR4F3Q6IEY1 312 aa12.96□□□□□ -0.34
NFKB1-202ENST00000394820 LIMS2Q7Z4I7 341 aa12.96□□□□□ -0.34
NFKB1-202ENST00000394820 TMEM125Q96AQ2 219 aa12.96□□□□□ -0.34
NFKB1-202ENST00000394820 TLR8Q9NR97 1041 aaKnown RBP12.96□□□□□ -0.34
NFKB1-202ENST00000394820 FCF1Q9Y324 198 aaKnown RBP12.96□□□□□ -0.34
NFKB1-202ENST00000394820 SAP18O00422 153 aaKnown RBP12.95□□□□□ -0.34
NFKB1-202ENST00000394820 GSTM1P09488 218 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 EPB42P16452 691 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 PTNP21246 168 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 LPOP22079 712 aaPredicted RBP12.95□□□□□ -0.34
NFKB1-202ENST00000394820 ACLYP53396 1101 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 ERVK-8P63133 956 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 GTF2H2Q13888 395 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 ABRAXAS2Q15018 415 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 SOWAHCQ53LP3 525 aaPredicted RBP12.95□□□□□ -0.34
NFKB1-202ENST00000394820 RNF219Q5W0B1 726 aaPredicted RBP12.95□□□□□ -0.34
NFKB1-202ENST00000394820 GTF2H2CQ6P1K8 395 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 RANBP10Q6VN20 620 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 HMGN2P46Q86SG4 172 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 TMEM132CQ8N3T6 1108 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 NKAPQ8N5F7 415 aaKnown RBP12.95□□□□□ -0.34
NFKB1-202ENST00000394820 TUBB1Q9H4B7 451 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 CD320Q9NPF0 282 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 RHCGQ9UBD6 479 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 AGO1Q9UL18 857 aaKnown RBP12.95□□□□□ -0.34
NFKB1-202ENST00000394820 RAI2Q9Y5P3 530 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 HTR3EA5X5Y0 456 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 TRIM24O15164 1050 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 MBL2P11226 248 aaPredicted RBP12.95□□□□□ -0.34
NFKB1-202ENST00000394820 CYP2C18P33260 490 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 IDUAP35475 653 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 ARCN1P48444 511 aaKnown RBP12.95□□□□□ -0.34
NFKB1-202ENST00000394820 HLCSP50747 726 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 CTBSQ01459 385 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 GANABQ14697 944 aaKnown RBP12.95□□□□□ -0.34
NFKB1-202ENST00000394820 SLC36A3Q495N2 470 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 PYCR3Q53H96 274 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 GPR65Q8IYL9 337 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 CACTIN-AS1Q8N1I8 211 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 PCSK9Q8NBP7 692 aaKnown RBP12.95□□□□□ -0.34
NFKB1-202ENST00000394820 HMGCLL1Q8TB92 370 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 TOP1MTQ969P6 601 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 PGAP3Q96FM1 320 aaPredicted RBP12.95□□□□□ -0.34
NFKB1-202ENST00000394820 GFM1Q96RP9 751 aaKnown RBP12.95□□□□□ -0.34
NFKB1-202ENST00000394820 TNKS2Q9H2K2 1166 aa12.95□□□□□ -0.34
NFKB1-202ENST00000394820 LRTM1Q9HBL6 345 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms