RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 SFRP1Q8N474 314 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 DCBLD1Q8N8Z6 715 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 OR7A2PQ8NGA2 310 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 NDNFQ8TB73 568 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.24■□□□□ 0.034e-6■■□□□ 14
PTBP1-204ENST00000394601 PDLIM5Q96HC4 596 aaKnown RBP15.24■□□□□ 0.03
PTBP1-204ENST00000394601 ZNF382Q96SR6 550 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 COQ7Q99807 217 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 CLSTN3Q9BQT9 956 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 HGH1Q9BTY7 390 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 REXO4Q9GZR2 422 aaKnown RBP15.24■□□□□ 0.03
PTBP1-204ENST00000394601 SNX5Q9Y5X3 404 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 XPNPEP2O43895 674 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 TSPAN3O60637 253 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 C1RP00736 705 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 RHOCP08134 193 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 INPP5AQ14642 412 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 ATP6AP1Q15904 470 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 CDKN3Q16667 212 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 RFPL4BQ6ZWI9 263 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 WFDC5Q8TCV5 224 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 INTS7Q9NVH2 962 aaKnown RBP15.23■□□□□ 0.03
PTBP1-204ENST00000394601 SMPD3Q9NY59 655 aaPredicted RBP15.23■□□□□ 0.03
PTBP1-204ENST00000394601 SRRDQ9UH36 339 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 RAD51BO15315 384 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 OR4F21O95013 312 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 IFI30P13284 250 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 CYP4B1P13584 511 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 PRKACGP22612 351 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 ZNF846Q147U1 533 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 KIAA0040Q15053 153 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 HECTD3Q5T447 861 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 ITIH5Q86UX2 942 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 NPAS4Q8IUM7 802 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 ZNF639Q9UID6 485 aa15.23■□□□□ 0.03
PTBP1-204ENST00000394601 TSR3Q9UJK0 312 aaKnown RBP15.23■□□□□ 0.03
PTBP1-204ENST00000394601 MEN1O00255 615 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 DEAF1O75398 565 aaPredicted RBP15.22■□□□□ 0.03
PTBP1-204ENST00000394601 CCNKO75909 580 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 ABLIM3O94929 683 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 MLYCDO95822 493 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 CDH1P12830 882 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 DCKP27707 260 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 HTR6P50406 440 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 ERVK-8P63133 956 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 LAPTM4AQ15012 233 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 OXA1LQ15070 435 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 COLEC12Q5KU26 742 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 FAM117BQ6P1L5 589 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 FAM126BQ8IXS8 530 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 ALDH16A1Q8IZ83 802 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 SEPT8Q92599 483 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 C17orf80Q9BSJ5 609 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 ALG2Q9H553 416 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 ATP13A3Q9H7F0 1226 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 PMF1-BGLAPU3KQ54 211 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 TFECO14948 347 aaPredicted RBP15.22■□□□□ 0.03
PTBP1-204ENST00000394601 INHBBP09529 407 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 SHMT2P34897 504 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 OR1D2P34982 312 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 NCS1P62166 190 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 PCBP2Q15366 365 aaKnown RBP eCLIP15.22■□□□□ 0.037e-7■■■□□ 15.6
PTBP1-204ENST00000394601 LKAAEAR1Q8TD35 194 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 PIH1D2Q8WWB5 315 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 SMURF2Q9HAU4 748 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 NEK6Q9HC98 313 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 STARD7Q9NQZ5 370 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 TLR9Q9NR96 1032 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 HEBP1Q9NRV9 189 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 ELOVL2Q9NXB9 296 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 DENND4CQ5VZ89 1909 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.22■□□□□ 0.03
PTBP1-204ENST00000394601 TAPBPO15533 448 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 VPS26AO75436 327 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 SLC22A3O75751 556 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 PTGER3P43115 390 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 IL2P60568 153 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 EPS8Q12929 822 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 ZNF177Q13360 481 aaPredicted RBP15.22■□□□□ 0.03
PTBP1-204ENST00000394601 SLC36A3Q495N2 470 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 SNAP47Q5SQN1 464 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 ZFAND4Q86XD8 727 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 GPSM1Q86YR5 675 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 DPP10Q8N608 796 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 PACRGLQ8N7B6 248 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 CHID1Q9BWS9 393 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 ZIM2Q9NZV7 527 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 SLCO3A1Q9UIG8 710 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 DHRS7Q9Y394 339 aa15.22■□□□□ 0.03
PTBP1-204ENST00000394601 POLR2JP52435 117 aaKnown RBP15.21■□□□□ 0.03
PTBP1-204ENST00000394601 SP3Q02447 781 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 EMX2Q04743 252 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 ELAVL2Q12926 359 aaKnown RBP15.21■□□□□ 0.03
PTBP1-204ENST00000394601 SMU1Q2TAY7 513 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 BROXQ5VW32 411 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 GPRIN3Q6ZVF9 776 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 NEK10Q6ZWH5 1172 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 ANKRD13BQ86YJ7 626 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 TRPV3Q8NET8 790 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 SLC22A12Q96S37 553 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms