RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 L2HGDHQ9H9P8 463 aa18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 TSR3Q9UJK0 312 aaKnown RBP18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 ICKQ9UPZ9 632 aa18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 VWA7Q9Y334 891 aa18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 NFS1Q9Y697 457 aa18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 GSAPA4D1B5 854 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 B4E171 279 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 BTN3A3O00478 584 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 BTN3A1O00481 513 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 KIF1CO43896 1103 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 SPAG6O75602 509 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 MATN4O95460 622 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 C1orf105O95561 183 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 ITIH1P19827 911 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 CD9P21926 228 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 ETV5P41161 510 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 TSPAN7P41732 249 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 SEPHS1P49903 392 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 GPX6P59796 221 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 KYNUQ16719 465 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 RBM20Q5T481 1227 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 TMEM164Q5U3C3 297 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 FAM45BPQ6NSW5 357 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 FAM129CQ86XR2 697 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 IFT20Q8IY31 132 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 GPATCH11Q8N954 259 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 GIMAP7Q8NHV1 300 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 FAM45AQ8TCE6 357 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 CD200R1Q8TD46 325 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 KLHL6Q8WZ60 621 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 UBXN4Q92575 508 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 RAD51AP1Q96B01 352 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 MAP3K3Q99759 626 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 ZNF768Q9H5H4 540 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 LRRC4CQ9HCJ2 640 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 ASCL3Q9NQ33 180 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 OCIAD1Q9NX40 245 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 OR6C2Q9NZP2 312 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 SEMA5BQ9P283 1151 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 TXNDC16Q9P2K2 825 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 PLAGL1Q9UM63 463 aa18.43■□□□□ 0.54
PDLIM7-204ENST00000393546 TCRBV9S1A1TA0A576 114 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 TLCD2A6NGC4 264 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 C2orf74A8MZ97 194 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 EIF3FO00303 357 aaPredicted RBP18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 TPBGLP0DKB5 382 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 MPC1LP0DKB6 136 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 FGF3P11487 239 aaPredicted RBP18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 MCM3P25205 808 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 ARL4DP49703 201 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 RGS4P49798 205 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 CDKN2DP55273 166 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 PPP1CAP62136 330 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 CUL1Q13616 776 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 HECTD2Q5U5R9 776 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 PROSER1Q86XN7 944 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 ADGRF3Q8IZF5 1079 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 CARFQ8N187 725 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 RAB42Q8N4Z0 105 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 USP7Q93009 1102 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 TAAR9Q96RI9 348 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 FMO2Q99518 471 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 NRTNQ99748 197 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 SMYD2Q9NRG4 433 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 SLC39A1Q9NY26 324 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 SLC39A10Q9ULF5 831 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 RUVBL2Q9Y230 463 aaKnown RBP18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 PCDHGA7Q9Y5G6 932 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 PSAT1Q9Y617 370 aa18.42■□□□□ 0.54
PDLIM7-204ENST00000393546 IGF2RP11717 2491 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 IGHV5-51A0A0C4DH38 117 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 PIPSLA2A3N6 862 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 FAM159BA6NKW6 160 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 CDRT15L2A8MXV6 281 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 ESPNB1AK53 854 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 NVLO15381 856 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 CATP04040 527 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 RHOXF2BP0C7M4 288 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 PRDX3P30048 256 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 STX2P32856 288 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 RAB28P51157 221 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 KPNA2P52292 529 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 TIAL1Q01085 375 aaKnown RBP eCLIP18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 MC2RQ01718 297 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 PDAP1Q13442 181 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 LRRC8EQ6NSJ5 796 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 CYHR1Q6ZMK1 362 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 CLEC14AQ86T13 490 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 ZC3HC1Q86WB0 502 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 KMT5CQ86Y97 462 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 CPNE9Q8IYJ1 553 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 ELMO2Q96JJ3 720 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 RHOXF2Q9BQY4 288 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 B3GNT4Q9C0J1 378 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 C1GALT1Q9NS00 363 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 ACTR10Q9NZ32 417 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 POMT2Q9UKY4 750 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 FRYQ5TBA9 3013 aa18.41■□□□□ 0.54
PDLIM7-204ENST00000393546 CXorf49A8MYA2 514 aaPredicted RBP18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 TAF4O00268 1085 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms