RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 PRDM9Q9NQV7 894 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 TRPM5Q9NZQ8 1165 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 MAP10Q9P2G4 905 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 JAG2Q9Y219 1238 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 PCDHB14Q9Y5E9 798 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 LMO7Q8WWI1 1683 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 MROH6A6NGR9 719 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 ATG12O94817 140 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 GNRH1P01148 92 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 TPOP07202 933 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 RD3LP0DJH9 198 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 SLC6A2P23975 617 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 PREPP48147 710 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 HNMTP50135 292 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 GTF2A2P52657 109 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 RRAS2P62070 204 aaPredicted RBP8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 DEFA5Q01523 94 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 MVKQ03426 396 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 WSCD2Q2TBF2 565 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 PRSS36Q5K4E3 855 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 SPOUT1Q5T280 376 aaKnown RBP8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 ZNF691Q5VV52 312 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 ATRAIDQ6UW56 229 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 C1orf186Q6ZWK4 172 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 CYP4Z2PQ8N1L4 340 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 PELI3Q8N2H9 469 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 C18orf25Q96B23 403 aaPredicted RBP8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 MRPL48Q96GC5 212 aaKnown RBP8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 MXRA8Q9BRK3 442 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 GSX2Q9BZM3 304 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 EXOSC4Q9NPD3 245 aaKnown RBP8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 BIN3Q9NQY0 253 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 SLC39A10Q9ULF5 831 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 ZFR2Q9UPR6 939 aaKnown RBP8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 ENTPD4Q9Y227 616 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 KCNMB2Q9Y691 235 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 FAM240BA0A1B0GVZ2 78 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 OR2A25A4D2G3 310 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 PCDHGA12O60330 932 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 EIF1BO60739 113 aaKnown RBP8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 MICAL2O94851 1124 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 OAZ2O95190 189 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 CST1P01037 141 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 HRGP04196 525 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 HOXC13P31276 330 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 ICAM3P32942 547 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 SPRP35270 261 aaPredicted RBP8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 EIF1P41567 113 aaKnown RBP8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 PCP4P48539 62 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 EIF6P56537 245 aaKnown RBP8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 NFYCQ13952 458 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 CCDC85BQ15834 202 aaPredicted RBP8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 GPR158Q5T848 1215 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 FAM219BQ5XKK7 198 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 CYB5R2Q6BCY4 276 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 PKN3Q6P5Z2 889 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 HACD2Q6Y1H2 254 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 ADGRD2Q7Z7M1 963 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 STPG2Q8N412 459 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 OR6S1Q8NH40 331 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 SMG7Q92540 1137 aaKnown RBP8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 NARS2Q96I59 477 aaKnown RBP8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 TMEM74Q96NL1 305 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 QRFPRQ96P65 431 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 MND1Q9BWT6 205 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 RBCK1Q9BYM8 510 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 NXF2Q9GZY0 626 aaKnown RBP8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 SLC22A11Q9NSA0 550 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 NLKQ9UBE8 527 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 ATXN7L1Q9ULK2 861 aaPredicted RBP8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 RUVBL2Q9Y230 463 aaKnown RBP8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 NDUFAF1Q9Y375 327 aa8.35□□□□□ -1.07
NHLRC3-201ENST00000379599 TCRBV5S2A0A599 114 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 TRABD2BA6NFA1 517 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 KIAA0513O60268 411 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 KDM4BO94953 1096 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 GRK5P34947 590 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 AVPR1AP37288 418 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 STARP49675 285 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 CDH8P55286 799 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 ERVK-25P63136 954 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 ZNF543Q08ER8 600 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 LARS2Q15031 903 aaKnown RBP8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 SNRNP35Q16560 246 aaKnown RBP8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 COL28A1Q2UY09 1125 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 FAM98BQ52LJ0 330 aaKnown RBP8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 PYDC2Q56P42 97 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 IER5Q5VY09 327 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 SV2AQ7L0J3 742 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 KRT74Q7RTS7 529 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 ABI3BPQ7Z7G0 1075 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 PHF13Q86YI8 300 aaPredicted RBP8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 ITFG1Q8TB96 612 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 IPCEF1Q8WWN9 437 aaPredicted RBP8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 LRRC58Q96CX6 371 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 FAM213AQ9BRX8 229 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 TEKT3Q9BXF9 490 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 ERVK-6Q9BXR3 956 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 DUSP21Q9H596 190 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms