RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 B3GNT8Q7Z7M8 397 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 AMIGO1Q86WK6 493 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 MARCH9Q86YJ5 346 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 FBXO15Q8NCQ5 510 aaPredicted RBP18.2■□□□□ 0.5
SSU72-203ENST00000378725 UHMK1Q8TAS1 419 aaKnown RBP18.2■□□□□ 0.5
SSU72-203ENST00000378725 MAGEC3Q8TD91 643 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 RAD51AP1Q96B01 352 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 SRMSQ9H3Y6 488 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 SYTL2Q9HCH5 934 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 HRASLS2Q9NWW9 162 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 TMEM9Q9P0T7 183 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 KLK13Q9UKR3 277 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 RAB21Q9UL25 225 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 SLC39A10Q9ULF5 831 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 ICKQ9UPZ9 632 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 TDRKHQ9Y2W6 561 aaKnown RBP18.2■□□□□ 0.5
SSU72-203ENST00000378725 NEUROG3Q9Y4Z2 214 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 MN1Q10571 1320 aaPredicted RBP18.2■□□□□ 0.5
SSU72-203ENST00000378725 RP1P56715 2156 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 HMX2A2RU54 273 aa18.19■□□□□ 0.5
SSU72-203ENST00000378725 OR6C74A6NCV1 312 aa18.19■□□□□ 0.5
SSU72-203ENST00000378725 TUBBP07437 444 aa18.19■□□□□ 0.5
SSU72-203ENST00000378725 ZNF37AP17032 561 aaPredicted RBP18.19■□□□□ 0.5
SSU72-203ENST00000378725 SAT1P21673 171 aa18.19■□□□□ 0.5
SSU72-203ENST00000378725 SHMT2P34897 504 aa18.19■□□□□ 0.5
SSU72-203ENST00000378725 CAMK2BQ13554 666 aa18.19■□□□□ 0.5
SSU72-203ENST00000378725 TRA2AQ13595 282 aaKnown RBP eCLIP18.19■□□□□ 0.5
SSU72-203ENST00000378725 ZKSCAN8Q15776 578 aaPredicted RBP18.19■□□□□ 0.5
SSU72-203ENST00000378725 PIWIL4Q7Z3Z4 852 aaKnown RBP18.19■□□□□ 0.5
SSU72-203ENST00000378725 ANKRD7Q92527 254 aa18.19■□□□□ 0.5
SSU72-203ENST00000378725 LINGO1Q96FE5 620 aa18.19■□□□□ 0.5
SSU72-203ENST00000378725 TSPAN17Q96FV3 270 aa18.19■□□□□ 0.5
SSU72-203ENST00000378725 NRTNQ99748 197 aa18.19■□□□□ 0.5
SSU72-203ENST00000378725 XKR8Q9H6D3 395 aa18.19■□□□□ 0.5
SSU72-203ENST00000378725 CAB39LQ9H9S4 337 aa18.19■□□□□ 0.5
SSU72-203ENST00000378725 TSR3Q9UJK0 312 aaKnown RBP18.19■□□□□ 0.5
SSU72-203ENST00000378725 ZNF180Q9UJW8 692 aa18.19■□□□□ 0.5
SSU72-203ENST00000378725 MSRB2Q9Y3D2 182 aa18.19■□□□□ 0.5
SSU72-203ENST00000378725 ARHGEF33A8MVX0 844 aa18.18■□□□□ 0.5
SSU72-203ENST00000378725 BTN3A3O00478 584 aa18.18■□□□□ 0.5
SSU72-203ENST00000378725 SLC16A5O15375 505 aa18.18■□□□□ 0.5
SSU72-203ENST00000378725 CAPN5O15484 640 aaPredicted RBP18.18■□□□□ 0.5
SSU72-203ENST00000378725 CATP04040 527 aaKnown RBP18.18■□□□□ 0.5
SSU72-203ENST00000378725 THRAP10827 490 aa18.18■□□□□ 0.5
SSU72-203ENST00000378725 SPINK2P20155 84 aa18.18■□□□□ 0.5
SSU72-203ENST00000378725 BDKRB1P46663 353 aa18.18■□□□□ 0.5
SSU72-203ENST00000378725 SLC12A2P55011 1212 aa18.18■□□□□ 0.5
SSU72-203ENST00000378725 CCSMST1Q4G0I0 132 aa18.18■□□□□ 0.5
SSU72-203ENST00000378725 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.18■□□□□ 0.5
SSU72-203ENST00000378725 ARHGAP22Q7Z5H3 698 aa18.18■□□□□ 0.5
SSU72-203ENST00000378725 OOSP2Q86WS3 158 aa18.18■□□□□ 0.5
SSU72-203ENST00000378725 ADGRF3Q8IZF5 1079 aa18.18■□□□□ 0.5
SSU72-203ENST00000378725 NKAPQ8N5F7 415 aaKnown RBP18.18■□□□□ 0.5
SSU72-203ENST00000378725 AENQ8WTP8 325 aaKnown RBP18.18■□□□□ 0.5
SSU72-203ENST00000378725 MRRFQ96E11 262 aaKnown RBP18.18■□□□□ 0.5
SSU72-203ENST00000378725 ZDHHC12Q96GR4 267 aa18.18■□□□□ 0.5
SSU72-203ENST00000378725 LIN37Q96GY3 246 aaPredicted RBP18.18■□□□□ 0.5
SSU72-203ENST00000378725 PAFAH2Q99487 392 aa18.18■□□□□ 0.5
SSU72-203ENST00000378725 DHRS4Q9BTZ2 278 aa18.18■□□□□ 0.5
SSU72-203ENST00000378725 SLC12A9Q9BXP2 914 aa18.18■□□□□ 0.5
SSU72-203ENST00000378725 RRAGDQ9NQL2 400 aaPredicted RBP18.18■□□□□ 0.5
SSU72-203ENST00000378725 OR6C2Q9NZP2 312 aa18.18■□□□□ 0.5
SSU72-203ENST00000378725 SEMA5BQ9P283 1151 aa18.18■□□□□ 0.5
SSU72-203ENST00000378725 FETUBQ9UGM5 382 aa18.18■□□□□ 0.5
SSU72-203ENST00000378725 MYO1CO00159 1063 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 MATN2O00339 956 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 RASGRF2O14827 1237 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 TOX3O15405 576 aaPredicted RBP18.17■□□□□ 0.5
SSU72-203ENST00000378725 ZBTB14O43829 449 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 C8GP07360 202 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 INHBAP08476 426 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 STMN1P16949 149 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 POLR2CP19387 275 aaPredicted RBP18.17■□□□□ 0.5
SSU72-203ENST00000378725 MPSTP25325 297 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 PKLRP30613 574 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 MSH2P43246 934 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 PPM1FP49593 454 aaPredicted RBP18.17■□□□□ 0.5
SSU72-203ENST00000378725 CSRP3P50461 194 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 RAB28P51157 221 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 GFERP55789 205 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 RAB10P61026 200 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 ZNF460Q14592 562 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 NAA30Q147X3 362 aaPredicted RBP18.17■□□□□ 0.5
SSU72-203ENST00000378725 EMBQ6PCB8 327 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 MYO1HQ8N1T3 1032 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 OR9A1PQ8NGU1 263 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 DCAKDQ8WVC6 231 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 ANKRD49Q8WVL7 239 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 DLG3Q92796 817 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 CCDC74BQ96LY2 380 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 GPAMQ9HCL2 828 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 PLAGL1Q9UM63 463 aa18.17■□□□□ 0.5
SSU72-203ENST00000378725 POC1B-GALNT4F8VUJ3 575 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 BTN3A1O00481 513 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 ANKRD34CP0C6C1 535 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 GCAP28676 217 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 CRABP2P29373 138 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 SERPINB9P50453 376 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 PPP1CAP62136 330 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 SP140Q13342 867 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms