RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 POPDC3Q9HBV1 291 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 IL17CQ9P0M4 197 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 ADGRE2Q9UHX3 823 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 VPS4AQ9UN37 437 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 DOCK3Q8IZD9 2030 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 MYOCOSA0A1B0GUC4 107 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 FPGTO14772 594 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 LDB2O43679 373 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 OR1F1O43749 312 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 GSRP00390 522 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 TRIM25Q14258 630 aaKnown RBP13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 SEMA3AQ14563 771 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 CNPY1Q3B7I2 92 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 ZNF776Q68DI1 518 aaPredicted RBP13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 GAREM2Q75VX8 874 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 TAF8Q7Z7C8 310 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 TREML1Q86YW5 311 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 APLFQ8IW19 511 aaPredicted RBP13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 PARP8Q8N3A8 854 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 ZFP28Q8NHY6 868 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 TFGQ92734 400 aaPredicted RBP13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 LRIG1Q96JA1 1093 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 ARNT2Q9HBZ2 717 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 QSER1Q2KHR3 1735 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 GJB3O75712 270 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 BPIP17213 487 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 AOC1P19801 751 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 CTSOP43234 321 aaPredicted RBP13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 EIF2B2P49770 351 aaKnown RBP13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 HNMTP50135 292 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 DNAJB13P59910 316 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 RGS1Q08116 209 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 EIF4HQ15056 248 aaKnown RBP13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 PHKG1Q16816 387 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 TRIM40Q6P9F5 258 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 HTR3DQ70Z44 454 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 PIANPQ8IYJ0 282 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 PHC3Q8NDX5 983 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 SHKBP1Q8TBC3 707 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 ANKRD49Q8WVL7 239 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 PRR11Q96HE9 360 aaPredicted RBP13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 SLC39A3Q9BRY0 314 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 DHRS4Q9BTZ2 278 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 RIBC2Q9H4K1 309 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 ALG2Q9H553 416 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 POLMQ9NP87 494 aaPredicted RBP13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 ITM2CQ9NQX7 267 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 RPS6KA6Q9UK32 745 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 TBX21Q9UL17 535 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 COLEC10Q9Y6Z7 277 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 STX16-NPEPL1H3BU86 382 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 HOXD9P28356 352 aaPredicted RBP13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 CLK1P49759 484 aaKnown RBP13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 LRRTM4Q86VH4 590 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 KBTBD2Q8IY47 623 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 GLYATL1Q969I3 302 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 MIPEPQ99797 713 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 HSFX1Q9UBD0 423 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 GULP1Q9UBP9 304 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 PTPRZ1P23471 2315 aaPredicted RBP13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 URADA6NGE7 173 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 OR6B1O95007 311 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 KRT75O95678 551 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 FRG2Q64ET8 278 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 AGTRAPQ6RW13 159 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 ENPP7Q6UWV6 458 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 ERN2Q76MJ5 926 aaKnown RBP13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 SLC13A3Q8WWT9 602 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 FRG2BQ96QU4 278 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 PCDHAC1Q9H158 963 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 ZDHHC7Q9NXF8 308 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 MAGEL2Q9UJ55 1249 aa13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 RUVBL1Q9Y265 456 aaKnown RBP13.89□□□□□ -0.19
SHROOM1-203ENST00000378679 PTGES3LE9PB15 166 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 CST1P01037 141 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 CBSLP0DN79 551 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 NR2F1P10589 423 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 CBSP35520 551 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 SLC16A1P53985 500 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 PTPN5P54829 565 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 DMPKQ09013 629 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 MPP7Q5T2T1 576 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 GOLGA7Q7Z5G4 137 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 RHEBL1Q8TAI7 183 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 MYLIPQ8WY64 445 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 CIB1Q99828 191 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 BOCQ9BWV1 1114 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 ROGDIQ9GZN7 287 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 IL26Q9NPH9 171 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 MRPS17Q9Y2R5 130 aaKnown RBP13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 AP4B1Q9Y6B7 739 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 U3KQV3 271 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 FAM220BPB1ANY3 271 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 STX16O14662 325 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 TNFAIP8O95379 198 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 PLA2G16P53816 162 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 MRPS15P82914 257 aaKnown RBP13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 RUNX3Q13761 415 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 C6orf52Q5T4I8 152 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 ZNF648Q5T619 568 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms