RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 FAM120BQ96EK7 910 aaKnown RBP15.56■□□□□ 0.08
CKAP4-201ENST00000378026 SEMA3CQ99985 751 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 CHCHD6Q9BRQ6 235 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 ITPAQ9BY32 194 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 OR2B2Q9GZK3 357 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 ABCG8Q9H221 673 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 DCAF13Q9NV06 445 aaKnown RBP15.56■□□□□ 0.08
CKAP4-201ENST00000378026 RNF6Q9Y252 685 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 PLXNA1Q9UIW2 1896 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 FAM172BPA6NC97 362 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 TFECO14948 347 aaPredicted RBP15.55■□□□□ 0.08
CKAP4-201ENST00000378026 DSCR3O14972 297 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 IRAK2O43187 625 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 NDUFS3O75489 264 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 CNMDO75829 334 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 AKT1P31749 480 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 CREMQ03060 361 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 CPZQ66K79 652 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 NEK10Q6ZWH5 1172 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 EFL1Q7Z2Z2 1120 aaKnown RBP15.55■□□□□ 0.08
CKAP4-201ENST00000378026 RTL3Q8N8U3 475 aaKnown RBP15.55■□□□□ 0.08
CKAP4-201ENST00000378026 SLC38A4Q969I6 547 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 ZBTB18Q99592 522 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 KCNS3Q9BQ31 491 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 OR51E2Q9H255 320 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 ATP13A1Q9HD20 1204 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 MED16Q9Y2X0 877 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 IPPQ9Y573 584 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 HS3ST4Q9Y661 456 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 BRCA1P38398 1863 aaKnown RBP15.55■□□□□ 0.08
CKAP4-201ENST00000378026 ARNTLO00327 626 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 HAT1O14929 419 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 FGF10O15520 208 aaPredicted RBP15.55■□□□□ 0.08
CKAP4-201ENST00000378026 OR1I1O60431 355 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 PEX11BO96011 259 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 VIPP01282 170 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 ATXN1LP0C7T5 689 aaKnown RBP15.55■□□□□ 0.08
CKAP4-201ENST00000378026 PRKCAP17252 672 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 STC1P52823 247 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 RFX4Q33E94 735 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 LIMS2Q7Z4I7 341 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 AADATQ8N5Z0 425 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 OR6F1Q8NGZ6 308 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 DNAJB3Q8WWF6 145 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 PPP1R2P1Q96PQ5 205 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 APOL4Q9BPW4 351 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 CDADC1Q9BWV3 514 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 DERL2Q9GZP9 239 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 PAQR5Q9NXK6 330 aaPredicted RBP15.55■□□□□ 0.08
CKAP4-201ENST00000378026 FBXL12Q9NXK8 326 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 PCDHGB6Q9Y5F9 930 aa15.55■□□□□ 0.08
CKAP4-201ENST00000378026 CENPXA8MT69 81 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 IQCF5A8MTL0 148 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 E2F3O00716 465 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 MED26O95402 600 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 JUNDP17535 347 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 ARHGDIAP52565 204 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 NUDT6P53370 316 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 IL18R1Q13478 541 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 MAD2L1BPQ15013 274 aaPredicted RBP15.54■□□□□ 0.08
CKAP4-201ENST00000378026 BCL7AQ4VC05 210 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 CIR1Q86X95 450 aaPredicted RBP15.54■□□□□ 0.08
CKAP4-201ENST00000378026 GALNT12Q8IXK2 581 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 TCAIMQ8N3R3 496 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 PGBD5Q8N414 524 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 AMER2Q8N7J2 671 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 OR4F6Q8NGB9 312 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 LINGO1Q96FE5 620 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 SMARCD1Q96GM5 515 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 NEDD4LQ96PU5 975 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 BEX2Q9BXY8 128 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 COL1A2P08123 1366 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 A0A0U1RQS6 177 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 LCHNA4D1U4 455 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 PER2O15055 1255 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 GPR32O75388 356 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 RPP40O75818 363 aaKnown RBP15.54■□□□□ 0.08
CKAP4-201ENST00000378026 SCELO95171 688 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 GUCA1CO95843 209 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 DEFA1P59665 94 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 DEFA3P59666 94 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 TIGD6Q17RP2 521 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 TWF2Q6IBS0 349 aaKnown RBP15.54■□□□□ 0.08
CKAP4-201ENST00000378026 ZCCHC8Q6NZY4 707 aaKnown RBP15.54■□□□□ 0.08
CKAP4-201ENST00000378026 PNCKQ6P2M8 343 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 RFPL4BQ6ZWI9 263 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 BEND7Q8N7W2 519 aaPredicted RBP15.54■□□□□ 0.08
CKAP4-201ENST00000378026 HASPINQ8TF76 798 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 DNASE1L2Q92874 299 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 MTFMTQ96DP5 389 aaKnown RBP15.54■□□□□ 0.08
CKAP4-201ENST00000378026 PYURFQ96I23 114 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 CCDC115Q96NT0 180 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 OR52E6Q96RD3 313 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 DPY30Q9C005 99 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 ROGDIQ9GZN7 287 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 FARSBQ9NSD9 589 aaKnown RBP15.54■□□□□ 0.08
CKAP4-201ENST00000378026 DKK3Q9UBP4 350 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 WBP11Q9Y2W2 641 aaKnown RBP15.54■□□□□ 0.08
CKAP4-201ENST00000378026 SLC12A8A0AV02 714 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 ADM5C9JUS6 153 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms