RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ATP5A1P25705 553 aaKnown RBP13.37□□□□□ -0.27
GPC6-201ENST00000377047 MPIP34949 423 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 PDX1P52945 283 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 CDH12P55289 794 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 TNFAIP8L2Q6P589 184 aaPredicted RBP13.37□□□□□ -0.27
GPC6-201ENST00000377047 PAQR3Q6TCH7 311 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 MBOAT1Q6ZNC8 495 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 DNAAF2Q9NVR5 837 aaKnown RBP13.37□□□□□ -0.27
GPC6-201ENST00000377047 hCG_2039718K7EN88 272 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 MT-ND1P03886 318 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 QPCTQ16769 361 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 WDR45BQ5MNZ6 344 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 LY6G5CQ5SRR4 150 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 SMARCD3Q6STE5 483 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 GTPBP3Q969Y2 492 aaKnown RBP13.37□□□□□ -0.27
GPC6-201ENST00000377047 TFB2MQ9H5Q4 396 aaKnown RBP13.37□□□□□ -0.27
GPC6-201ENST00000377047 TESMINQ9Y4I5 508 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 OAS3Q9Y6K5 1087 aaKnown RBP13.37□□□□□ -0.27
GPC6-201ENST00000377047 SRRM3A6NNA2 597 aaPredicted RBP13.37□□□□□ -0.27
GPC6-201ENST00000377047 ALPPP05187 535 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 BTN3A2P78410 334 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 FAM174BQ3ZCQ3 159 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 RNASE12Q5GAN4 147 aaKnown RBP13.37□□□□□ -0.27
GPC6-201ENST00000377047 C22orf39Q6P5X5 142 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 B3GNT6Q6ZMB0 384 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 IGSF21Q96ID5 467 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 FBXL18Q96ME1 805 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 RBM4BQ9BQ04 359 aaKnown RBP13.37□□□□□ -0.27
GPC6-201ENST00000377047 YIPF4Q9BSR8 244 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 RBM4Q9BWF3 364 aaKnown RBP13.37□□□□□ -0.27
GPC6-201ENST00000377047 SLC17A6Q9P2U8 582 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 TAC3Q9UHF0 121 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 BCKDKO14874 412 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 CSTF2P33240 577 aaKnown RBP eCLIP13.37□□□□□ -0.273e-9■■■■■ 28
GPC6-201ENST00000377047 ARRB1P49407 418 aaPredicted RBP13.37□□□□□ -0.27
GPC6-201ENST00000377047 NPY5RQ15761 445 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 ITPRIPL2Q3MIP1 535 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 MFSD5Q6N075 450 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 AAGABQ6PD74 315 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 TRIB2Q92519 343 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 LPGAT1Q92604 370 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 PLEKHG4BQ96PX9 1271 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 DUSP26Q9BV47 211 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 ABCB10Q9NRK6 738 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 DNAJB4Q9UDY4 337 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 KCNK6Q9Y257 313 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 KDELR3O43731 214 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 ARCN1P48444 511 aaKnown RBP13.37□□□□□ -0.27
GPC6-201ENST00000377047 GFOD2Q3B7J2 385 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 EIPR1Q53HC9 387 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 LRRC66Q68CR7 880 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 GPR65Q8IYL9 337 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 OR4E2Q8NGC2 313 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 NCSTNQ92542 709 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 RIT1Q92963 219 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 CLPTM1LQ96KA5 538 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 GATA5Q9BWX5 397 aaPredicted RBP13.37□□□□□ -0.27
GPC6-201ENST00000377047 C11orf16Q9NQ32 467 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 DZANK1Q9NVP4 752 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 CDH22Q9UJ99 828 aa13.37□□□□□ -0.27
GPC6-201ENST00000377047 CCDC182A6NF36 153 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 FAM25EA8MYX2 175 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 NME6O75414 186 aaPredicted RBP13.36□□□□□ -0.27
GPC6-201ENST00000377047 POP7O75817 140 aaKnown RBP13.36□□□□□ -0.27
GPC6-201ENST00000377047 FAM163BP0C2L3 166 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 HYAL2Q12891 473 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 MYBPC3Q14896 1274 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 MS4A13Q5J8X5 152 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 NUDT13Q86X67 352 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 CPNE8Q86YQ8 564 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 NUSAP1Q9BXS6 441 aaKnown RBP13.36□□□□□ -0.27
GPC6-201ENST00000377047 CLK4Q9HAZ1 481 aaKnown RBP13.36□□□□□ -0.27
GPC6-201ENST00000377047 RBM47A0AV96 593 aaKnown RBP13.36□□□□□ -0.27
GPC6-201ENST00000377047 HAS3O00219 553 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 HAT1O14929 419 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 CHST10O43529 356 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 CCNB2O95067 398 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 ADH1BP00325 375 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 GNALP38405 381 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 MNDAP41218 407 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 DPYSQ14117 519 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 FAM92BQ6ZTR7 304 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 P4HA3Q7Z4N8 544 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 RGMAQ96B86 450 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 MUC13Q9H3R2 512 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 ZNF304Q9HCX3 659 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 ZNF282Q9UDV7 671 aaPredicted RBP13.36□□□□□ -0.27
GPC6-201ENST00000377047 DMTF1Q9Y222 760 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 ERI3O43414 337 aaKnown RBP13.36□□□□□ -0.27
GPC6-201ENST00000377047 SERPINA1P01009 418 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 NCK1P16333 377 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 SCNN1AP37088 669 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 PPP2R2BQ00005 443 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 RIPK1Q13546 671 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 CDKN2AIPNLQ96HQ2 116 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 TBL1XR1Q9BZK7 514 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 RGS17Q9UGC6 210 aaPredicted RBP13.36□□□□□ -0.27
GPC6-201ENST00000377047 MED31Q9Y3C7 131 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 IRAK3Q9Y616 596 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 KNDC1Q76NI1 1749 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms