RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 SPRY1O43609 319 aaPredicted RBP1.99□□□□□ -2.09
VPS13A-206ENST00000376646 PDE9AO76083 593 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 SORBS2O94875 1100 aaKnown RBP1.99□□□□□ -2.09
VPS13A-206ENST00000376646 GCNT3O95395 438 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 GJA1P17302 382 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 MMP15P51511 669 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 ARSEP51690 589 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 MLLT10P55197 1068 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 CDH13P55290 713 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 ALCAMQ13740 583 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 MVPQ14764 893 aaKnown RBP1.99□□□□□ -2.09
VPS13A-206ENST00000376646 SLC1A5Q15758 541 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 SNAPC1Q16533 368 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 RAB6CQ53S08 254 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 NDUFAF5Q5TEU4 345 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 ZDHHC20Q5W0Z9 365 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 ALS2CLQ60I27 953 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 DHRS7BQ6IAN0 325 aaPredicted RBP1.99□□□□□ -2.09
VPS13A-206ENST00000376646 TMEM211Q6ICI0 200 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 TPRG1Q6ZUI0 275 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 CAMKMTQ7Z624 323 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 GTSCR1Q86UQ5 136 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 ADIPOR2Q86V24 386 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 CEP57Q86XR8 500 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 GALNT13Q8IUC8 556 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 SLC38A9Q8NBW4 561 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 CFAP61Q8NHU2 1237 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 TEKT4Q8WW24 435 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 ZNF689Q96CS4 500 aaPredicted RBP1.99□□□□□ -2.09
VPS13A-206ENST00000376646 RMDN1Q96DB5 314 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 DACH2Q96NX9 599 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 RHNO1Q9BSD3 238 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 RAB6CQ9H0N0 254 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 FGF22Q9HCT0 170 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 TRMT1Q9NXH9 659 aaKnown RBP1.99□□□□□ -2.09
VPS13A-206ENST00000376646 TMEM181Q9P2C4 612 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 AMACRQ9UHK6 382 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 KCNJ14Q9UNX9 436 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 DISP3Q9P2K9 1392 aa1.99□□□□□ -2.09
VPS13A-206ENST00000376646 TEX13DA0A0J9YY54 714 aaPredicted RBP1.98□□□□□ -2.09
VPS13A-206ENST00000376646 TRBC2A0A5B9 178 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 A8MXE2 369 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 NDUFS4O43181 175 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 CREG1O75629 220 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 HSPA4LO95757 839 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 IGHV4-38-2P0DP08 117 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 VPREB1P12018 145 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 GLULP15104 373 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 CBLP22681 906 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 EEF1DP29692 281 aaKnown RBP1.98□□□□□ -2.09
VPS13A-206ENST00000376646 GABRA5P31644 462 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 MC5RP33032 325 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 CCR3P51677 355 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 LUMP51884 338 aaPredicted RBP1.98□□□□□ -2.09
VPS13A-206ENST00000376646 DSCR10P59022 87 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 SIRPAP78324 504 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 SP3Q02447 781 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 PRKAA1Q13131 559 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 CAMK2DQ13557 499 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 KIAA1644Q3SXP7 199 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 CRY2Q49AN0 593 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 TCP11X2Q5H9J9 407 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 ZNF534Q76KX8 674 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 VSIG1Q86XK7 387 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 PTOV1Q86YD1 416 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 TC2NQ8N9U0 490 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 HCAR2Q8TDS4 363 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 DNAAF4Q8WXU2 420 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 MRPS27Q92552 414 aaKnown RBP1.98□□□□□ -2.09
VPS13A-206ENST00000376646 NXNL1Q96CM4 212 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 LINC00615Q96LM1 132 aaPredicted RBP1.98□□□□□ -2.09
VPS13A-206ENST00000376646 ZNF830Q96NB3 372 aaPredicted RBP1.98□□□□□ -2.09
VPS13A-206ENST00000376646 VGLL1Q99990 258 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 OLAHQ9NV23 265 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 MRGBPQ9NV56 204 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 WBP11Q9Y2W2 641 aaKnown RBP1.98□□□□□ -2.09
VPS13A-206ENST00000376646 A0A1W2PRQ8 180 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 TCRBV21S2A2A0A5A6 115 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 PSMD14O00487 310 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 PRAMEF11O60813 436 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 ZNF23P17027 643 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 ZNF10P21506 573 aaPredicted RBP1.98□□□□□ -2.09
VPS13A-206ENST00000376646 THOP1P52888 689 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 RAD23AP54725 363 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 SNRPEP62304 92 aaKnown RBP1.98□□□□□ -2.09
VPS13A-206ENST00000376646 DUOXA1Q1HG43 343 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 CBWD6Q4V339 395 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 CBWD3Q5JTY5 395 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 KRT80Q6KB66 452 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 PACS1Q6VY07 963 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 KRT77Q7Z794 578 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 ZNF595Q8IYB9 648 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 CRYBG2Q8N1P7 616 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 GCSAMQ8N6F7 178 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 C1orf52Q8N6N3 182 aaKnown RBP1.98□□□□□ -2.09
VPS13A-206ENST00000376646 DDHD1Q8NEL9 900 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 ERLEC1Q96DZ1 483 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 C18orf12Q96KH6 178 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 ASCL2Q99929 193 aa1.98□□□□□ -2.09
VPS13A-206ENST00000376646 DCTN5Q9BTE1 182 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms