RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 SLC7A1P30825 629 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 GDF5P43026 501 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 YAP1P46937 504 aaKnown RBP13.69□□□□□ -0.22
MSH5-202ENST00000375740 POLR2JP52435 117 aaKnown RBP13.69□□□□□ -0.22
MSH5-202ENST00000375740 NFYCQ13952 458 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 RCAN2Q14206 197 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 TEAD2Q15562 447 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 PAGE3Q5JUK9 113 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 LDLRAP1Q5SW96 308 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 MILR1Q7Z6M3 343 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 PPIL1Q9Y3C6 166 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 KRBA1A5PL33 1030 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 CCDC154A6NI56 674 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 AKAP10O43572 662 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 POP4O95707 220 aaKnown RBP13.69□□□□□ -0.22
MSH5-202ENST00000375740 OTCP00480 354 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 UGT2B4P06133 528 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 PFKLP17858 780 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 ATP6V1B2P21281 511 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 PTPN5P54829 565 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 ATP13A5Q4VNC0 1218 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 LRRC73Q5JTD7 316 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 USP45Q70EL2 814 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 SNX29P2Q8IUI4 249 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 CHST14Q8NCH0 376 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 DNAJB14Q8TBM8 379 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 MYLIPQ8WY64 445 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 PBXIP1Q96AQ6 731 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 EMILIN2Q9BXX0 1053 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 CPEB1Q9BZB8 566 aaKnown RBP13.69□□□□□ -0.22
MSH5-202ENST00000375740 LINC00597Q9H2U6 94 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 ZDHHC3Q9NYG2 299 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 EGFL7Q9UHF1 273 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 SLC25A13Q9UJS0 675 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 PCDHA9Q9Y5H5 950 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 PIKFYVEQ9Y2I7 2098 aa13.69□□□□□ -0.22
MSH5-202ENST00000375740 FAM149AA5PLN7 773 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 TRIM64CA6NLI5 447 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 ZNF839A8K0R7 811 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 A8MU76 341 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 NDUFB5O43674 189 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 RFPL2O75678 378 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 NSG1P42857 185 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 HTRA4P83105 476 aaPredicted RBP13.68□□□□□ -0.22
MSH5-202ENST00000375740 TRAF3Q13114 568 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 ABRAXAS2Q15018 415 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 HABP4Q5JVS0 413 aaKnown RBP13.68□□□□□ -0.22
MSH5-202ENST00000375740 OR2T34Q8NGX1 318 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 OR2T3Q8NH03 318 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 PROKR1Q8TCW9 393 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 ZUFSPQ96AP4 578 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 BBS2Q9BXC9 721 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 CD244Q9BZW8 370 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 BRD9Q9H8M2 597 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 POLR1BQ9H9Y6 1135 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 ZIM2Q9NZV7 527 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 CNOT6Q9ULM6 557 aaKnown RBP13.68□□□□□ -0.22
MSH5-202ENST00000375740 HELZP42694 1942 aaKnown RBP13.68□□□□□ -0.22
MSH5-202ENST00000375740 CXorf51AA0A1B0GTR3 108 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 H0YJX3 145 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 MOSPD3O75425 235 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 KCNH1O95259 989 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 HSD17B1P14061 328 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 CASP2P42575 452 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 B4GALNT1Q00973 533 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 MOGQ16653 247 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 PLPP4Q5VZY2 271 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 SULT1C3Q6IMI6 304 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 GALNT18Q6P9A2 607 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 SPPL2CQ8IUH8 684 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 SCAIQ8N9R8 606 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 TMEM125Q96AQ2 219 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 RHBDF1Q96CC6 855 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 FBXL20Q96IG2 436 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 MCCC1Q96RQ3 725 aaPredicted RBP13.68□□□□□ -0.22
MSH5-202ENST00000375740 IL23AQ9NPF7 189 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 LATS2Q9NRM7 1088 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 WWOXQ9NZC7 414 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 SLAMF8Q9P0V8 285 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 ERGIC3Q9Y282 383 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 ANGPTL3Q9Y5C1 460 aa13.68□□□□□ -0.22
MSH5-202ENST00000375740 FAM234BA2RU67 622 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 EEDO75530 441 aaKnown RBP13.67□□□□□ -0.22
MSH5-202ENST00000375740 PABPC1P11940 636 aaKnown RBP13.67□□□□□ -0.22
MSH5-202ENST00000375740 DCKP27707 260 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 EMX2Q04743 252 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 FOXM1Q08050 763 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 NEDD8Q15843 81 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 RGS21Q2M5E4 152 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 RABL3Q5HYI8 236 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 Q6ZVU0 165 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 RAVER1Q8IY67 606 aaKnown RBP13.67□□□□□ -0.22
MSH5-202ENST00000375740 OFCC1Q8IZS5 231 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 ADAMTS16Q8TE57 1224 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 CANT1Q8WVQ1 401 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 IRF7Q92985 503 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 CLP1Q92989 425 aaKnown RBP13.67□□□□□ -0.22
MSH5-202ENST00000375740 COPS8Q99627 209 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 DOK1Q99704 481 aa13.67□□□□□ -0.22
MSH5-202ENST00000375740 SOX17Q9H6I2 414 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms