RNA–Protein interactions for RNA: ENST00000375635.6

C6orf48-202, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-202ENST00000375635 KRT87PA6NCN2 255 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 CXorf49A8MYA2 514 aaPredicted RBP12.92□□□□□ -0.34
C6orf48-202ENST00000375635 C9orf172C9J069 976 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 BTN3A1O00481 513 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 C1orf105O95561 183 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 POLR2CP19387 275 aaPredicted RBP12.92□□□□□ -0.34
C6orf48-202ENST00000375635 CD9P21926 228 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 MAGEA4P43358 317 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 KPNA2P52292 529 aaKnown RBP12.92□□□□□ -0.34
C6orf48-202ENST00000375635 PGGT1BP53609 377 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 CDKN2DP55273 166 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 KRT33BQ14525 404 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 CCSMST1Q4G0I0 132 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 GLE1Q53GS7 698 aaKnown RBP12.92□□□□□ -0.34
C6orf48-202ENST00000375635 UBAP2Q5T6F2 1119 aaKnown RBP12.92□□□□□ -0.34
C6orf48-202ENST00000375635 IRGCQ6NXR0 463 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 FOXR1Q6PIV2 292 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 CAPN12Q6ZSI9 719 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 FAM92BQ6ZTR7 304 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 OOSP2Q86WS3 158 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 CEP112Q8N8E3 955 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 LMNTD1Q8N9Z9 388 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 LINC01555Q8NAE3 123 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 ZNF578Q96N58 590 aaPredicted RBP12.92□□□□□ -0.34
C6orf48-202ENST00000375635 MAP3K3Q99759 626 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 ZNF768Q9H5H4 540 aaKnown RBP12.92□□□□□ -0.34
C6orf48-202ENST00000375635 LRRC4CQ9HCJ2 640 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 PPANQ9NQ55 473 aaKnown RBP12.92□□□□□ -0.34
C6orf48-202ENST00000375635 FOXJ2Q9P0K8 574 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 POLG2Q9UHN1 485 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 POMT2Q9UKY4 750 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 PLAGL1Q9UM63 463 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 PTPRQQ9UMZ3 2332 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 RAXQ9Y2V3 346 aa12.92□□□□□ -0.34
C6orf48-202ENST00000375635 CACNA1BQ00975 2339 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 SDK2Q58EX2 2172 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 ITPR1Q14643 2758 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 TCRBV9S1A1TA0A576 114 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 SRRM3A6NNA2 597 aaPredicted RBP12.91□□□□□ -0.34
C6orf48-202ENST00000375635 B4E171 279 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 E5RI56 91 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 NVLO15381 856 aaKnown RBP12.91□□□□□ -0.34
C6orf48-202ENST00000375635 PSIP1O75475 530 aaKnown RBP12.91□□□□□ -0.34
C6orf48-202ENST00000375635 JMJD7P0C870 316 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 PEBP1P30086 187 aaKnown RBP12.91□□□□□ -0.34
C6orf48-202ENST00000375635 PKLRP30613 574 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 SLC5A2P31639 672 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 CSTF2P33240 577 aaKnown RBP eCLIP12.91□□□□□ -0.34
C6orf48-202ENST00000375635 TSPAN7P41732 249 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 PPM1FP49593 454 aaPredicted RBP12.91□□□□□ -0.34
C6orf48-202ENST00000375635 MC2RQ01718 297 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 CUL1Q13616 776 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 KLHL38Q2WGJ6 581 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.91□□□□□ -0.34
C6orf48-202ENST00000375635 CACHD1Q5VU97 1274 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 FBXO38Q6PIJ6 1188 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 NEK10Q6ZWH5 1172 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 AMIGO1Q86WK6 493 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 DCUN1D3Q8IWE4 304 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 CFAP61Q8NHU2 1237 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 DENND1AQ8TEH3 1009 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 INPP5DQ92835 1189 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 FGF11Q92914 225 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 USP7Q93009 1102 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 ZDHHC12Q96GR4 267 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 SLC41A2Q96JW4 573 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 CD180Q99467 661 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 PITPNM3Q9BZ71 974 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 SPRY4Q9C004 299 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 B3GNT4Q9C0J1 378 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 FAM114A2Q9NRY5 505 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 SPHK1Q9NYA1 384 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 CIDEBQ9UHD4 219 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 ACSL6Q9UKU0 697 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 TDRKHQ9Y2W6 561 aaKnown RBP12.91□□□□□ -0.34
C6orf48-202ENST00000375635 PCDHGA3Q9Y5H0 932 aa12.91□□□□□ -0.34
C6orf48-202ENST00000375635 TLCD2A6NGC4 264 aa12.9□□□□□ -0.34
C6orf48-202ENST00000375635 FAM159BA6NKW6 160 aa12.9□□□□□ -0.34
C6orf48-202ENST00000375635 EFCAB7A8K855 629 aa12.9□□□□□ -0.34
C6orf48-202ENST00000375635 ARHGEF33A8MVX0 844 aa12.9□□□□□ -0.34
C6orf48-202ENST00000375635 ZNF500O60304 480 aaPredicted RBP12.9□□□□□ -0.34
C6orf48-202ENST00000375635 PRAMEF10O60809 474 aa12.9□□□□□ -0.34
C6orf48-202ENST00000375635 TSPAN12O95859 305 aa12.9□□□□□ -0.34
C6orf48-202ENST00000375635 GSTA2P09210 222 aa12.9□□□□□ -0.34
C6orf48-202ENST00000375635 NELFEP18615 380 aaKnown RBP12.9□□□□□ -0.34
C6orf48-202ENST00000375635 FDXRP22570 491 aa12.9□□□□□ -0.34
C6orf48-202ENST00000375635 RBMS1P29558 406 aaKnown RBP12.9□□□□□ -0.34
C6orf48-202ENST00000375635 PRDX3P30048 256 aaKnown RBP12.9□□□□□ -0.34
C6orf48-202ENST00000375635 SHMT2P34897 504 aa12.9□□□□□ -0.34
C6orf48-202ENST00000375635 EIF2S3P41091 472 aaKnown RBP12.9□□□□□ -0.34
C6orf48-202ENST00000375635 BDKRB1P46663 353 aa12.9□□□□□ -0.34
C6orf48-202ENST00000375635 SEPHS1P49903 392 aa12.9□□□□□ -0.34
C6orf48-202ENST00000375635 MAPK10P53779 464 aa12.9□□□□□ -0.34
C6orf48-202ENST00000375635 SH3BP2P78314 561 aa12.9□□□□□ -0.34
C6orf48-202ENST00000375635 ST3GAL2Q16842 350 aa12.9□□□□□ -0.34
C6orf48-202ENST00000375635 DNTTIP2Q5QJE6 756 aaKnown RBP12.9□□□□□ -0.34
C6orf48-202ENST00000375635 PAQR3Q6TCH7 311 aa12.9□□□□□ -0.34
C6orf48-202ENST00000375635 C3orf62Q6ZUJ4 267 aa12.9□□□□□ -0.34
C6orf48-202ENST00000375635 SLC26A11Q86WA9 606 aa12.9□□□□□ -0.34
C6orf48-202ENST00000375635 ZC3HC1Q86WB0 502 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms