RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 COLEC12Q5KU26 742 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 KHDRBS2Q5VWX1 349 aaKnown RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 TLDC1Q6P9B6 456 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 FAM220AQ7Z4H9 259 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 SNX20Q7Z614 316 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 POMGNT2Q8NAT1 580 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 RASSF5Q8WWW0 418 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 VMP1Q96GC9 406 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 ART5Q96L15 291 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 ZNF347Q96SE7 839 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 EQTNQ9NQ60 294 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 MCUBQ9NWR8 336 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 ZNF282Q9UDV7 671 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 CD84Q9UIB8 345 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 H7C0S8 307 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 HLA-DQA2P01906 255 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 STC1P52823 247 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 FKBP1BP68106 108 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 CBX2Q14781 532 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-203ENST00000375274 ZNF655Q8N720 491 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-203ENST00000375274 RAD51AP1Q96B01 352 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 ISOC1Q96CN7 298 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 KCNS3Q9BQ31 491 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 MYH3P11055 1940 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 PRRC2BQ5JSZ5 2229 aaKnown RBP11.32□□□□□ -0.6
PTCH1-203ENST00000375274 RBM47A0AV96 593 aaKnown RBP11.32□□□□□ -0.6
PTCH1-203ENST00000375274 URADA6NGE7 173 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 A6NHS1 94 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 ARHGEF33A8MVX0 844 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 PAPSS2O95340 614 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-203ENST00000375274 SPATA31D3P0C874 917 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 MYLK3Q32MK0 819 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 GPR33Q49SQ1 333 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 LIN54Q6MZP7 749 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 NAPRTQ6XQN6 538 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 SPATA31D4Q6ZUB0 917 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 SLC43A3Q8NBI5 491 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 OR4F6Q8NGB9 312 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 OR10G2Q8NGC3 310 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 RPL10LQ96L21 214 aaKnown RBP11.32□□□□□ -0.6
PTCH1-203ENST00000375274 PCYT2Q99447 389 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 OXCT2Q9BYC2 517 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-203ENST00000375274 LMAN2LQ9H0V9 348 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 SMOC2Q9H3U7 446 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 C11orf16Q9NQ32 467 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 SNTG1Q9NSN8 517 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 DKK3Q9UBP4 350 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 POP4O95707 220 aaKnown RBP11.32□□□□□ -0.6
PTCH1-203ENST00000375274 ENO2P09104 434 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-203ENST00000375274 GMPRP36959 345 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 ACVRL1P37023 503 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 RGS8P57771 180 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-203ENST00000375274 LSAMPQ13449 338 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 TUBA3CQ13748 450 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 MEP1AQ16819 746 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 CHST15Q7LFX5 561 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-203ENST00000375274 CFAP206Q8IYR0 622 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 SIX5Q8N196 739 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 CXorf40BQ96DE9 158 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 DERL2Q9GZP9 239 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 RNF208Q9H0X6 261 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 IMP3Q9NV31 184 aaKnown RBP11.32□□□□□ -0.6
PTCH1-203ENST00000375274 SNX7Q9UNH6 387 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 OR10H1Q9Y4A9 318 aa11.32□□□□□ -0.6
PTCH1-203ENST00000375274 OR10H2O60403 315 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 KLHL18O94889 574 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 DHRS4L1P0CG22 281 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 SLC35E2BP0CK96 405 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 WNT7BP56706 349 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 ABATP80404 500 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 FCHO2Q0JRZ9 810 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 LAPTM5Q13571 262 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 IQCCQ4KMZ1 466 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 SPANXN4Q5MJ08 99 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 UBE2J2Q8N2K1 259 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 TSPEARQ8WU66 669 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 TOR3AQ9H497 397 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 CCDC177Q9NQR7 707 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-203ENST00000375274 ZSCAN32Q9NX65 697 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 STON1Q9Y6Q2 735 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 FABP12A6NFH5 140 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 FAM72CH0Y354 149 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 PRKACGP22612 351 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 ATP4BP51164 291 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 PNLIPRP1P54315 467 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 ABHD18Q0P651 414 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 HEPACAMQ14CZ8 416 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 FAM72AQ5TYM5 149 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 LCN1P1Q5VSP4 162 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 FAM72DQ6L9T8 149 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 FAM72BQ86X60 149 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 COMMD2Q86X83 199 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 TRPV1Q8NER1 839 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 MOSPD2Q8NHP6 518 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 AURKBQ96GD4 344 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-203ENST00000375274 MUS81Q96NY9 551 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 FERD3LQ96RJ6 166 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 TLE6Q9H808 572 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 CCM2LQ9NUG4 571 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-203ENST00000375274 CREG1O75629 220 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms