RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 MLLT3P42568 568 aaPredicted RBP20.37■□□□□ 0.85
MAP1LC3A-202ENST00000374837 MAPK10P53779 464 aa20.37■□□□□ 0.85
MAP1LC3A-202ENST00000374837 GPX6P59796 221 aa20.37■□□□□ 0.85
MAP1LC3A-202ENST00000374837 ERVPABLB-1P60509 514 aa20.37■□□□□ 0.85
MAP1LC3A-202ENST00000374837 TIAL1Q01085 375 aaKnown RBP eCLIP20.37■□□□□ 0.85
MAP1LC3A-202ENST00000374837 RBM20Q5T481 1227 aaKnown RBP20.37■□□□□ 0.85
MAP1LC3A-202ENST00000374837 C3orf62Q6ZUJ4 267 aa20.37■□□□□ 0.85
MAP1LC3A-202ENST00000374837 PRSS42Q7Z5A4 293 aa20.37■□□□□ 0.85
MAP1LC3A-202ENST00000374837 FGF11Q92914 225 aa20.37■□□□□ 0.85
MAP1LC3A-202ENST00000374837 SMYD2Q9NRG4 433 aa20.37■□□□□ 0.85
MAP1LC3A-202ENST00000374837 ZFATQ9P243 1243 aa20.37■□□□□ 0.85
MAP1LC3A-202ENST00000374837 PLAGL1Q9UM63 463 aa20.37■□□□□ 0.85
MAP1LC3A-202ENST00000374837 RUVBL2Q9Y230 463 aaKnown RBP20.37■□□□□ 0.85
MAP1LC3A-202ENST00000374837 PSAT1Q9Y617 370 aa20.37■□□□□ 0.85
MAP1LC3A-202ENST00000374837 PIKFYVEQ9Y2I7 2098 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 BTN3A1O00481 513 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 VPS26AO75436 327 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 RASSF9O75901 435 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 RPN2P04844 631 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 SEPHS1P49903 392 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 PRKAA1Q13131 559 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 KYNUQ16719 465 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 KLHL38Q2WGJ6 581 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 TTLL9Q3SXZ7 439 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 DNTTIP2Q5QJE6 756 aaKnown RBP20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 DCUN1D3Q8IWE4 304 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 ADGRF3Q8IZF5 1079 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 CD200R1Q8TD46 325 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 KLHL6Q8WZ60 621 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 USP7Q93009 1102 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 FOPNLQ96NB1 174 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 MAP3K3Q99759 626 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 ZNF768Q9H5H4 540 aaKnown RBP20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 THSD1Q9NS62 852 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 SEMA5BQ9P283 1151 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 CIDEBQ9UHD4 219 aa20.36■□□□□ 0.85
MAP1LC3A-202ENST00000374837 B4E171 279 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 PIAS1O75925 651 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 MATN4O95460 622 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 C1orf105O95561 183 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 GSTA2P09210 222 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 SHMT2P34897 504 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 TSPAN7P41732 249 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 KPNA2P52292 529 aaKnown RBP20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 CDKN2DP55273 166 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 CUL1Q13616 776 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 GRB7Q14451 532 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 CYS1Q717R9 158 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 STRA8Q7Z7C7 330 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 CLEC14AQ86T13 490 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 FAM129CQ86XR2 697 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 BMPERQ8N8U9 685 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 IFT81Q8WYA0 676 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 PPM1MQ96MI6 270 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 CD180Q99467 661 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 LRRC4CQ9HCJ2 640 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 RAXQ9Y2V3 346 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 PCDHGA7Q9Y5G6 932 aa20.35■□□□□ 0.85
MAP1LC3A-202ENST00000374837 IGHV5-51A0A0C4DH38 117 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 TCRBV9S1A1TA0A576 114 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 GSAPA4D1B5 854 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 CXorf49A8MYA2 514 aaPredicted RBP20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 SLC5A2P31639 672 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 BDKRB1P46663 353 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 MC2RQ01718 297 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 CCSMST1Q4G0I0 132 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 HECTD2Q5U5R9 776 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 UGT3A1Q6NUS8 523 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 TTC23LQ6PF05 361 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 FBXO38Q6PIJ6 1188 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 CYHR1Q6ZMK1 362 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 NEK10Q6ZWH5 1172 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 SLC26A11Q86WA9 606 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 GPATCH11Q8N954 259 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 LRRN4CLQ8ND94 238 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 SNIP1Q8TAD8 396 aaKnown RBP20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 UBXN4Q92575 508 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 TAAR9Q96RI9 348 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 MENTQ9BUN1 341 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 FAM129AQ9BZQ8 928 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 L2HGDHQ9H9P8 463 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 SLC39A1Q9NY26 324 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 TAS2R13Q9NYV9 303 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 OR6C2Q9NZP2 312 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 TRMT6Q9UJA5 497 aaKnown RBP20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 POMT2Q9UKY4 750 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 VWA7Q9Y334 891 aa20.34■□□□□ 0.85
MAP1LC3A-202ENST00000374837 ITPR1Q14643 2758 aa20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 TLCD2A6NGC4 264 aa20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 C9orf172C9J069 976 aa20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 MATN2O00339 956 aa20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 NVLO15381 856 aaKnown RBP20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 KDM1AO60341 852 aa20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 C1QAP02745 245 aa20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 CHRM5P08912 532 aaPredicted RBP20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 MPC1LP0DKB6 136 aa20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 CD9P21926 228 aa20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 MCM3P25205 808 aa20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 PRDX3P30048 256 aaKnown RBP20.33■□□□□ 0.85
MAP1LC3A-202ENST00000374837 PKLRP30613 574 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms