RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 TMEM151BQ8IW70 566 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 PIANPQ8IYJ0 282 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 GALNT16Q8N428 558 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 CLEC1AQ8NC01 280 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 OR5AR1Q8NGP9 310 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 FLVCR1-AS1Q8TAF5 88 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 CCDC110Q8TBZ0 833 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 INPP5DQ92835 1189 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 FER1L6-AS2Q96M78 137 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 SPATA13Q96N96 652 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 OR2A14Q96R47 310 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 RANBP9Q96S59 729 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 FAM118BQ9BPY3 351 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 TBL1YQ9BQ87 522 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 C17orf62Q9BQA9 187 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 ZNF552Q9H707 407 aaPredicted RBP13.32□□□□□ -0.28
CXCL12-202ENST00000374426 SPHK1Q9NYA1 384 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.32□□□□□ -0.28
CXCL12-202ENST00000374426 PTRH2Q9Y3E5 179 aaKnown RBP13.32□□□□□ -0.28
CXCL12-202ENST00000374426 AP1M2Q9Y6Q5 423 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 DIDO1Q9BTC0 2240 aaKnown RBP13.32□□□□□ -0.28
CXCL12-202ENST00000374426 ANKRD12Q6UB98 2062 aa13.32□□□□□ -0.28
CXCL12-202ENST00000374426 MACROD2A1Z1Q3 448 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 H7C0S8 307 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 KCNN4O15554 427 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 PJA2O43164 708 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 ALPPP05187 535 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 TPBGLP0DKB5 382 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 ATXN8OSP0DMR3 200 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 RBP3P10745 1247 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 FOLR3P41439 243 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 MAGEA1P43355 309 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 EIF3EP60228 445 aaKnown RBP13.31□□□□□ -0.28
CXCL12-202ENST00000374426 COPS2P61201 443 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 DCDP81605 110 aaKnown RBP13.31□□□□□ -0.28
CXCL12-202ENST00000374426 ZRANB3Q5FWF4 1079 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 ZNF449Q6P9G9 518 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 CNGA4Q8IV77 575 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 CDKL3Q8IVW4 592 aaPredicted RBP13.31□□□□□ -0.28
CXCL12-202ENST00000374426 KLHDC8BQ8IXV7 354 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 OR2Y1Q8NGV0 311 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 PROKR1Q8TCW9 393 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 N4BP2L2Q92802 583 aaPredicted RBP13.31□□□□□ -0.28
CXCL12-202ENST00000374426 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.31□□□□□ -0.28
CXCL12-202ENST00000374426 BARD1Q99728 777 aaKnown RBP13.31□□□□□ -0.28
CXCL12-202ENST00000374426 FERMT1Q9BQL6 677 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 CHRNA10Q9GZZ6 450 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 P4HTMQ9NXG6 502 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 DHCR7Q9UBM7 475 aaKnown RBP13.31□□□□□ -0.28
CXCL12-202ENST00000374426 CDYLQ9Y232 598 aa13.31□□□□□ -0.28
CXCL12-202ENST00000374426 MDC1Q14676 2089 aaKnown RBP13.31□□□□□ -0.28
CXCL12-202ENST00000374426 SNRNP200O75643 2136 aaKnown RBP13.3□□□□□ -0.28
CXCL12-202ENST00000374426 ANKUB1A6NFN9 424 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 AKR1B15C9JRZ8 316 aaPredicted RBP13.3□□□□□ -0.28
CXCL12-202ENST00000374426 PEX12O00623 359 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 ZSCAN9O15535 394 aaPredicted RBP13.3□□□□□ -0.28
CXCL12-202ENST00000374426 STK10O94804 968 aaKnown RBP13.3□□□□□ -0.28
CXCL12-202ENST00000374426 UMODP07911 640 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 CHRM5P08912 532 aaPredicted RBP13.3□□□□□ -0.28
CXCL12-202ENST00000374426 GSTM1P09488 218 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 ACADLP28330 430 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 SHMT2P34897 504 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 GSTM4Q03013 218 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 TBX2Q13207 712 aaPredicted RBP13.3□□□□□ -0.28
CXCL12-202ENST00000374426 SLC9A5Q14940 896 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 DBN1Q16643 649 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 LYPLAL1Q5VWZ2 237 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 MRPL14Q6P1L8 145 aaKnown RBP13.3□□□□□ -0.28
CXCL12-202ENST00000374426 TAS2R42Q7RTR8 314 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 PPP1R32Q7Z5V6 425 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 HOOK3Q86VS8 718 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 ZNF655Q8N720 491 aaPredicted RBP13.3□□□□□ -0.28
CXCL12-202ENST00000374426 OSBPL8Q9BZF1 889 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 ILKAPQ9H0C8 392 aaPredicted RBP13.3□□□□□ -0.28
CXCL12-202ENST00000374426 ZBTB20Q9HC78 741 aaPredicted RBP13.3□□□□□ -0.28
CXCL12-202ENST00000374426 NLE1Q9NVX2 485 aaPredicted RBP13.3□□□□□ -0.28
CXCL12-202ENST00000374426 IFT80Q9P2H3 777 aaPredicted RBP13.3□□□□□ -0.28
CXCL12-202ENST00000374426 NDOR1Q9UHB4 597 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 GPN3Q9UHW5 284 aaPredicted RBP13.3□□□□□ -0.28
CXCL12-202ENST00000374426 FEZ2Q9UHY8 353 aaPredicted RBP13.3□□□□□ -0.28
CXCL12-202ENST00000374426 SLC5A6Q9Y289 635 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 ASF1AQ9Y294 204 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 EFR3BQ9Y2G0 817 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 NTNG1Q9Y2I2 539 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 PRSS21Q9Y6M0 314 aa13.3□□□□□ -0.28
CXCL12-202ENST00000374426 A0A0J9YY10 115 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 LIN7AO14910 233 aaPredicted RBP13.29□□□□□ -0.28
CXCL12-202ENST00000374426 AP2A2O94973 939 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 IGHEP01854 428 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 CD63P08962 238 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 TPH1P17752 444 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 CTNNA1P35221 906 aaKnown RBP13.29□□□□□ -0.28
CXCL12-202ENST00000374426 PTPN7P35236 360 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 SOX8P57073 446 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 CACNG1Q06432 222 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 NKAIN1Q4KMZ8 207 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 KCTD11Q693B1 232 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 DARS2Q6PI48 645 aaKnown RBP13.29□□□□□ -0.28
CXCL12-202ENST00000374426 Q6ZS92 163 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 CUZD1Q86UP6 607 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms