RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 PAGE3Q5JUK9 113 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 TMEM220Q6QAJ8 160 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 SPATA24Q86W54 205 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 ZFAND4Q86XD8 727 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 MMAAQ8IVH4 418 aaKnown RBP19.12■□□□□ 0.65
HDAC1-201ENST00000373548 SLC15A3Q8IY34 581 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 UCMAQ8WVF2 138 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 SUSD6Q92537 303 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 GLMNQ92990 594 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 ERLEC1Q96DZ1 483 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 NUS1Q96E22 293 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 CCM2Q9BSQ5 444 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 ZNHIT2Q9UHR6 403 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 SLC5A10A0PJK1 596 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 CCDC154A6NI56 674 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 MMP20O60882 483 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 SLC2A4P14672 509 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 SLC6A2P23975 617 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 PEX2P28328 305 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 RPL38P63173 70 aaKnown RBP19.12■□□□□ 0.65
HDAC1-201ENST00000373548 HMGCS1Q01581 520 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 HYAL1Q12794 435 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 ABRQ12979 859 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 TIGD2Q4W5G0 525 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 ANKRD54Q6NXT1 300 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 TMEM184AQ6ZMB5 413 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 ZNF765Q7L2R6 523 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 TRIM74Q86UV6 250 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 NLRP8Q86W28 1048 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 TMEM159Q96B96 161 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 MYADMQ96S97 322 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 ECSITQ9BQ95 431 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 PRSS16Q9NQE7 514 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 THAP10Q9P2Z0 257 aaPredicted RBP19.12■□□□□ 0.65
HDAC1-201ENST00000373548 EPS15L1Q9UBC2 864 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 MSRAQ9UJ68 235 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 KCNE1BA0A087WTH5 132 aa19.11■□□□□ 0.65
HDAC1-201ENST00000373548 ARHGEF33A8MVX0 844 aa19.11■□□□□ 0.65
HDAC1-201ENST00000373548 PSIP1O75475 530 aaKnown RBP19.11■□□□□ 0.65
HDAC1-201ENST00000373548 FOXM1Q08050 763 aa19.11■□□□□ 0.65
HDAC1-201ENST00000373548 PRKG2Q13237 762 aa19.11■□□□□ 0.65
HDAC1-201ENST00000373548 NFYCQ13952 458 aa19.11■□□□□ 0.65
HDAC1-201ENST00000373548 CPSF6Q16630 551 aaKnown RBP eCLIP19.11■□□□□ 0.65
HDAC1-201ENST00000373548 LRRC36Q1X8D7 754 aa19.11■□□□□ 0.65
HDAC1-201ENST00000373548 SLC44A4Q53GD3 710 aa19.11■□□□□ 0.65
HDAC1-201ENST00000373548 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.11■□□□□ 0.65
HDAC1-201ENST00000373548 HABP4Q5JVS0 413 aaKnown RBP19.11■□□□□ 0.65
HDAC1-201ENST00000373548 ERN2Q76MJ5 926 aaKnown RBP19.11■□□□□ 0.65
HDAC1-201ENST00000373548 FBXL8Q96CD0 374 aa19.11■□□□□ 0.65
HDAC1-201ENST00000373548 MRPL38Q96DV4 380 aaKnown RBP19.11■□□□□ 0.65
HDAC1-201ENST00000373548 KXD1Q9BQD3 176 aa19.11■□□□□ 0.65
HDAC1-201ENST00000373548 CMTM6Q9NX76 183 aa19.11■□□□□ 0.65
HDAC1-201ENST00000373548 C6orf203Q9P0P8 240 aaPredicted RBP19.11■□□□□ 0.65
HDAC1-201ENST00000373548 LEF1Q9UJU2 399 aaPredicted RBP19.11■□□□□ 0.65
HDAC1-201ENST00000373548 SLC22A14Q9Y267 594 aa19.11■□□□□ 0.65
HDAC1-201ENST00000373548 LRCH1Q9Y2L9 728 aa19.11■□□□□ 0.65
HDAC1-201ENST00000373548 REV3LO60673 3130 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.1■□□□□ 0.65
HDAC1-201ENST00000373548 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.1■□□□□ 0.65
HDAC1-201ENST00000373548 DNAJA2O60884 412 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 KAT7O95251 611 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 ITPKAP23677 461 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 TRIP10Q15642 601 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 MAP7D1Q3KQU3 841 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 GGTA1PQ4G0N0 100 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 TMEM52BQ4KMG9 183 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 EGFLAMQ63HQ2 1017 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 YAF2Q8IY57 180 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 RGL4Q8IZJ4 473 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 FOXJ1Q92949 421 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 ATG10Q9H0Y0 220 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 SLC28A3Q9HAS3 691 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 DYRK4Q9NR20 520 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 DNAJC11Q9NVH1 559 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 PRSS51A0A1B0GVH4 220 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 LZTS3O60299 673 aaPredicted RBP19.1■□□□□ 0.65
HDAC1-201ENST00000373548 PRAMEF4O60810 478 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 RSL1D1O76021 490 aaKnown RBP19.1■□□□□ 0.65
HDAC1-201ENST00000373548 KRT6AP02538 564 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 KRT6BP04259 564 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 EPHX1P07099 455 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 C8BP07358 591 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 PBLDP30039 288 aaPredicted RBP19.1■□□□□ 0.65
HDAC1-201ENST00000373548 KRT6CP48668 564 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 PFN3P60673 137 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 SMU1Q2TAY7 513 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 ZNF658BQ4V348 819 aaPredicted RBP19.1■□□□□ 0.65
HDAC1-201ENST00000373548 PRAMEF9Q5VWM5 478 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 PPP2R3CQ969Q6 453 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 MTFMTQ96DP5 389 aaKnown RBP19.1■□□□□ 0.65
HDAC1-201ENST00000373548 EPHX3Q9H6B9 360 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 GULP1Q9UBP9 304 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 PCDHA9Q9Y5H5 950 aa19.1■□□□□ 0.65
HDAC1-201ENST00000373548 P2RY2P41231 377 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 GPR1P46091 355 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 GNPDA1P46926 289 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 IMPG1Q17R60 797 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 AAK1Q2M2I8 961 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 RAET1GQ6H3X3 334 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 DSG4Q86SJ6 1040 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms