RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 PCDHA9Q9Y5H5 950 aa23.17■■□□□ 1.3
SNX21-204ENST00000372542 AREL1O15033 823 aa23.17■■□□□ 1.3
SNX21-204ENST00000372542 SPINT1O43278 529 aa23.17■■□□□ 1.3
SNX21-204ENST00000372542 HLA-EP13747 358 aa23.17■■□□□ 1.3
SNX21-204ENST00000372542 EPORP19235 508 aa23.17■■□□□ 1.3
SNX21-204ENST00000372542 FCARP24071 287 aa23.17■■□□□ 1.3
SNX21-204ENST00000372542 MAP4P27816 1152 aaKnown RBP23.17■■□□□ 1.3
SNX21-204ENST00000372542 ATXN3P54252 364 aaPredicted RBP23.17■■□□□ 1.3
SNX21-204ENST00000372542 DSG4Q86SJ6 1040 aa23.17■■□□□ 1.3
SNX21-204ENST00000372542 BEND7Q8N7W2 519 aaPredicted RBP23.17■■□□□ 1.3
SNX21-204ENST00000372542 ZBTB18Q99592 522 aa23.17■■□□□ 1.3
SNX21-204ENST00000372542 ZFP14Q9HCL3 533 aa23.17■■□□□ 1.3
SNX21-204ENST00000372542 CMTM6Q9NX76 183 aa23.17■■□□□ 1.3
SNX21-204ENST00000372542 ARNTLO00327 626 aa23.16■■□□□ 1.3
SNX21-204ENST00000372542 ANKRD28O15084 1053 aa23.16■■□□□ 1.3
SNX21-204ENST00000372542 TSPAN6O43657 245 aa23.16■■□□□ 1.3
SNX21-204ENST00000372542 PSIP1O75475 530 aaKnown RBP23.16■■□□□ 1.3
SNX21-204ENST00000372542 RPL38P63173 70 aaKnown RBP23.16■■□□□ 1.3
SNX21-204ENST00000372542 MRPS35P82673 323 aaKnown RBP23.16■■□□□ 1.3
SNX21-204ENST00000372542 PTCHD3Q3KNS1 767 aa23.16■■□□□ 1.3
SNX21-204ENST00000372542 TIGD2Q4W5G0 525 aa23.16■■□□□ 1.3
SNX21-204ENST00000372542 CACHD1Q5VU97 1274 aa23.16■■□□□ 1.3
SNX21-204ENST00000372542 L3MBTL4Q8NA19 623 aa23.16■■□□□ 1.3
SNX21-204ENST00000372542 GOLM1Q8NBJ4 401 aa23.16■■□□□ 1.3
SNX21-204ENST00000372542 ADCY4Q8NFM4 1077 aa23.16■■□□□ 1.3
SNX21-204ENST00000372542 ATL1Q8WXF7 558 aa23.16■■□□□ 1.3
SNX21-204ENST00000372542 NR1H4Q96RI1 486 aaPredicted RBP23.16■■□□□ 1.3
SNX21-204ENST00000372542 EFHD1Q9BUP0 239 aa23.16■■□□□ 1.3
SNX21-204ENST00000372542 LRTM1Q9HBL6 345 aa23.16■■□□□ 1.3
SNX21-204ENST00000372542 DYRK4Q9NR20 520 aa23.16■■□□□ 1.3
SNX21-204ENST00000372542 DTNAQ9Y4J8 743 aa23.16■■□□□ 1.3
SNX21-204ENST00000372542 AP4S1Q9Y587 144 aa23.16■■□□□ 1.3
SNX21-204ENST00000372542 SLC7A1P30825 629 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 CAPRIN1Q14444 709 aaKnown RBP23.15■■□□□ 1.3
SNX21-204ENST00000372542 LRRC36Q1X8D7 754 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 GRAMD1BQ3KR37 738 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 TMEM52BQ4KMG9 183 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 PAGE3Q5JUK9 113 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 ZNF648Q5T619 568 aaPredicted RBP23.15■■□□□ 1.3
SNX21-204ENST00000372542 NLRP8Q86W28 1048 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 GLB1L3Q8NCI6 653 aaPredicted RBP23.15■■□□□ 1.3
SNX21-204ENST00000372542 TMEM125Q96AQ2 219 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 NUS1Q96E22 293 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 FAM129BQ96TA1 746 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 COPS7BQ9H9Q2 264 aaPredicted RBP23.15■■□□□ 1.3
SNX21-204ENST00000372542 TCF20Q9UGU0 1960 aaKnown RBP23.15■■□□□ 1.3
SNX21-204ENST00000372542 SLC5A10A0PJK1 596 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 C1QTNF3-AMACRE9PGA6 284 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 ADRB3P13945 408 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 CTSCP53634 463 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 EEFSECP57772 596 aaKnown RBP23.15■■□□□ 1.3
SNX21-204ENST00000372542 BCL7AQ4VC05 210 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 SFT2D3Q587I9 215 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 RGL4Q8IZJ4 473 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 OR2T34Q8NGX1 318 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 OR2T3Q8NH03 318 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 SUSD6Q92537 303 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 BTBD9Q96Q07 612 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 ACTL8Q9H568 366 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 FARSBQ9NSD9 589 aaKnown RBP23.15■■□□□ 1.3
SNX21-204ENST00000372542 C1orf109Q9NX04 203 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 CDH7Q9ULB5 785 aa23.15■■□□□ 1.3
SNX21-204ENST00000372542 DENND4AQ7Z401 1863 aa23.14■■□□□ 1.29
SNX21-204ENST00000372542 KCNE1BA0A087WTH5 132 aa23.14■■□□□ 1.29
SNX21-204ENST00000372542 SERTM1A2A2V5 107 aa23.14■■□□□ 1.29
SNX21-204ENST00000372542 TBC1D3BA6NDS4 549 aa23.14■■□□□ 1.29
SNX21-204ENST00000372542 AQP12BA6NM10 295 aa23.14■■□□□ 1.29
SNX21-204ENST00000372542 CATP04040 527 aaKnown RBP23.14■■□□□ 1.29
SNX21-204ENST00000372542 CAPNS1P04632 268 aa23.14■■□□□ 1.29
SNX21-204ENST00000372542 VARSP26640 1264 aaKnown RBP23.14■■□□□ 1.29
SNX21-204ENST00000372542 CCR3P51677 355 aa23.14■■□□□ 1.29
SNX21-204ENST00000372542 FCHO2Q0JRZ9 810 aa23.14■■□□□ 1.29
SNX21-204ENST00000372542 ZXDCQ2QGD7 858 aaPredicted RBP23.14■■□□□ 1.29
SNX21-204ENST00000372542 TANGO2Q6ICL3 276 aa23.14■■□□□ 1.29
SNX21-204ENST00000372542 TMEM220Q6QAJ8 160 aa23.14■■□□□ 1.29
SNX21-204ENST00000372542 VITQ6UXI7 678 aa23.14■■□□□ 1.29
SNX21-204ENST00000372542 AQP12AQ8IXF9 295 aa23.14■■□□□ 1.29
SNX21-204ENST00000372542 KLHDC8AQ8IYD2 350 aa23.14■■□□□ 1.29
SNX21-204ENST00000372542 ICA1LQ8NDH6 482 aa23.14■■□□□ 1.29
SNX21-204ENST00000372542 SLC45A3Q96JT2 553 aa23.14■■□□□ 1.29
SNX21-204ENST00000372542 UGDHO60701 494 aa23.13■■□□□ 1.29
SNX21-204ENST00000372542 RECQL5O94762 991 aaPredicted RBP23.13■■□□□ 1.29
SNX21-204ENST00000372542 PBX2P40425 430 aa23.13■■□□□ 1.29
SNX21-204ENST00000372542 METAP1P53582 386 aa23.13■■□□□ 1.29
SNX21-204ENST00000372542 ZNF33BQ06732 778 aa23.13■■□□□ 1.29
SNX21-204ENST00000372542 DPTQ07507 201 aa23.13■■□□□ 1.29
SNX21-204ENST00000372542 RUNX3Q13761 415 aa23.13■■□□□ 1.29
SNX21-204ENST00000372542 CPSF6Q16630 551 aaKnown RBP eCLIP23.13■■□□□ 1.29
SNX21-204ENST00000372542 ERN2Q76MJ5 926 aaKnown RBP23.13■■□□□ 1.29
SNX21-204ENST00000372542 FAM9CQ8IZT9 166 aa23.13■■□□□ 1.29
SNX21-204ENST00000372542 SELENOMQ8WWX9 145 aa23.13■■□□□ 1.29
SNX21-204ENST00000372542 CCDC138Q96M89 665 aa23.13■■□□□ 1.29
SNX21-204ENST00000372542 FOPNLQ96NB1 174 aa23.13■■□□□ 1.29
SNX21-204ENST00000372542 PKP2Q99959 881 aa23.13■■□□□ 1.29
SNX21-204ENST00000372542 ELOVL6Q9H5J4 265 aa23.13■■□□□ 1.29
SNX21-204ENST00000372542 ACTR3BQ9P1U1 418 aa23.13■■□□□ 1.29
SNX21-204ENST00000372542 CNOT6Q9ULM6 557 aaKnown RBP23.13■■□□□ 1.29
SNX21-204ENST00000372542 COL4A3Q01955 1670 aa23.13■■□□□ 1.29
SNX21-204ENST00000372542 NPIPB8E9PQR5 432 aa23.12■■□□□ 1.29
SNX21-204ENST00000372542 INPP4BO15327 924 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms