RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 TRIM64A6NGJ6 449 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 TRIM64BA6NI03 449 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 C2orf74A8MZ97 194 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 ONECUT2O95948 504 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 PEX11BO96011 259 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 PNMA6AP0CW24 399 aaPredicted RBP7.53□□□□□ -1.2
YIPF3-201ENST00000372417 ITGAMP11215 1152 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 ZNF24P17028 368 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 ERCC2P18074 760 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 CA4P22748 312 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 SYKP43405 635 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 GABRA4P48169 554 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 ARSFP54793 590 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 NUP107P57740 925 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 DCDC1P59894 354 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 APBA1Q02410 837 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 EEF1A2Q05639 463 aaKnown RBP7.53□□□□□ -1.2
YIPF3-201ENST00000372417 ITKQ08881 620 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 PMPCAQ10713 525 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 TMEM115Q12893 351 aaPredicted RBP7.53□□□□□ -1.2
YIPF3-201ENST00000372417 CUL4AQ13619 759 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 KRT33BQ14525 404 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 CAMK4Q16566 473 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 PPP1R15BQ5SWA1 713 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 CATSPEREQ5SY80 951 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 TAF3Q5VWG9 929 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 NAA35Q5VZE5 725 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 TXNRD3NBQ6F5E7 133 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 NLRP9Q7RTR0 991 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 YTHDF3Q7Z739 585 aaKnown RBP7.53□□□□□ -1.2
YIPF3-201ENST00000372417 CXorf67Q86X51 503 aaPredicted RBP7.53□□□□□ -1.2
YIPF3-201ENST00000372417 TRIM59Q8IWR1 403 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 LRRC75A-AS1Q8N1F1 130 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 RPRMLQ8N4K4 120 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 TMEM178AQ8NBL3 297 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 LPCAT1Q8NF37 534 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 DENND1AQ8TEH3 1009 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 FAM222BQ8WU58 562 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 LCN9Q8WX39 176 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.53□□□□□ -1.2
YIPF3-201ENST00000372417 SCMH1Q96GD3 660 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 TTC25Q96NG3 672 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 TDRD1Q9BXT4 1180 aaKnown RBP7.53□□□□□ -1.2
YIPF3-201ENST00000372417 HES7Q9BYE0 225 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 SLC6A16Q9GZN6 736 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 PLEKHF2Q9H8W4 249 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 NT5MQ9NPB1 228 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 RIC8BQ9NVN3 520 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 HPSEQ9Y251 543 aa7.53□□□□□ -1.2
YIPF3-201ENST00000372417 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.53□□□□□ -1.2
YIPF3-201ENST00000372417 A0A1B0GTH9 108 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 VSTM2BA6NLU5 285 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 FOXN3O00409 490 aaPredicted RBP7.52□□□□□ -1.21
YIPF3-201ENST00000372417 BTN3A3O00478 584 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 DSCR3O14972 297 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 CCP110O43303 1012 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 SMPD2O60906 423 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 POP7O75817 140 aaKnown RBP7.52□□□□□ -1.21
YIPF3-201ENST00000372417 MT-CYBP00156 380 aaPredicted RBP7.52□□□□□ -1.21
YIPF3-201ENST00000372417 SLC35G4P0C7Q5 338 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 CD46P15529 392 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 SLC9A1P19634 815 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 PBLDP30039 288 aaPredicted RBP7.52□□□□□ -1.21
YIPF3-201ENST00000372417 PTGER1P34995 402 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 ARSEP51690 589 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 RPL26P61254 145 aaKnown RBP7.52□□□□□ -1.21
YIPF3-201ENST00000372417 NOMO3P69849 1222 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 KLC1Q07866 573 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 KRTAP24-1Q3LI83 254 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 ZNF658Q5TYW1 1059 aaPredicted RBP7.52□□□□□ -1.21
YIPF3-201ENST00000372417 MARC1Q5VT66 337 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 METRNLQ641Q3 311 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 SPESP1Q6UW49 350 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 PRSS57Q6UWY2 283 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 RFX8Q6ZV50 586 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 MCATQ8IVS2 390 aaKnown RBP7.52□□□□□ -1.21
YIPF3-201ENST00000372417 BEND7Q8N7W2 519 aaPredicted RBP7.52□□□□□ -1.21
YIPF3-201ENST00000372417 GPR26Q8NDV2 337 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 MDS2Q8NDY4 140 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 ACVR1CQ8NER5 493 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 GDAP1Q8TB36 358 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.52□□□□□ -1.21
YIPF3-201ENST00000372417 ZNF592Q92610 1267 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 SIGLEC12Q96PQ1 595 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 CHRNA10Q9GZZ6 450 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 ZFYVE1Q9HBF4 777 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 RAD18Q9NS91 495 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 RMND1Q9NWS8 449 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 ACTR10Q9NZ32 417 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 NFKBIL1Q9UBC1 381 aaPredicted RBP7.52□□□□□ -1.21
YIPF3-201ENST00000372417 C3orf18Q9UK00 162 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 RPL26L1Q9UNX3 145 aaKnown RBP7.52□□□□□ -1.21
YIPF3-201ENST00000372417 AP4E1Q9UPM8 1137 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 HRH3Q9Y5N1 445 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 HEBP2Q9Y5Z4 205 aa7.52□□□□□ -1.21
YIPF3-201ENST00000372417 MGAM2Q2M2H8 2515 aa7.51□□□□□ -1.21
YIPF3-201ENST00000372417 IGHV1-45A0A0A0MS14 117 aa7.51□□□□□ -1.21
YIPF3-201ENST00000372417 RASGRF2O14827 1237 aa7.51□□□□□ -1.21
YIPF3-201ENST00000372417 SLC4A1P02730 911 aa7.51□□□□□ -1.21
YIPF3-201ENST00000372417 KRT3P12035 628 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms