RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 ATOH8Q96SQ7 321 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 DPH2Q9BQC3 489 aaPredicted RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 SPATC1LQ9H0A9 340 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 DCSTAMPQ9H295 470 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 AIG1Q9NVV5 245 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 PAQR5Q9NXK6 330 aaPredicted RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 FBXL12Q9NXK8 326 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 UXTQ9UBK9 157 aaPredicted RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 DKK3Q9UBP4 350 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 MED16Q9Y2X0 877 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 IFT52Q9Y366 437 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 SZT2Q5T011 3432 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ILVBLA1L0T0 632 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 CASTOR2A6NHX0 329 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 ZNF487B1APH4 448 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 ERVH48-1M5A8F1 160 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 KMOO15229 486 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 IDH3BO43837 385 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 HBP1O60381 514 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 FAM20BO75063 409 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 DEAF1O75398 565 aaPredicted RBP5.31□□□□□ -1.56
ATG4A-204ENST00000372246 UPK1BO75841 260 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 CSF2P04141 144 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 ANXA6P08133 673 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 RAP2AP10114 183 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 EDNRBP24530 442 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 AQP1P29972 269 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 CDKN2CP42773 168 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 DAPP51397 102 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 RPL38P63173 70 aaKnown RBP5.31□□□□□ -1.56
ATG4A-204ENST00000372246 MRPS15P82914 257 aaKnown RBP5.31□□□□□ -1.56
ATG4A-204ENST00000372246 DAB2P98082 770 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 TNFAIP2Q03169 654 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 SLAMF1Q13291 335 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 E2F2Q14209 437 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 CBX2Q14781 532 aaPredicted RBP5.31□□□□□ -1.56
ATG4A-204ENST00000372246 DGUOKQ16854 277 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 FAM174BQ3ZCQ3 159 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 FAM98BQ52LJ0 330 aaKnown RBP5.31□□□□□ -1.56
ATG4A-204ENST00000372246 ALFQ53S48 1182 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 SPANXN4Q5MJ08 99 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 PRR23CQ6ZRP0 262 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 NRARPQ7Z6K4 114 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 DPP9Q86TI2 863 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 PTRH1Q86Y79 214 aaKnown RBP5.31□□□□□ -1.56
ATG4A-204ENST00000372246 CHPFQ8IZ52 775 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 CRYBG2Q8N1P7 616 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 ELMOD1Q8N336 334 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 FBXO39Q8N4B4 442 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 MEIOBQ8N635 442 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 PAPD5Q8NDF8 572 aaKnown RBP5.31□□□□□ -1.56
ATG4A-204ENST00000372246 BEST2Q8NFU1 509 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 OR2T12Q8NG77 320 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 EEF1AKMT1Q8WVE0 214 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 YIPF6Q96EC8 236 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 L3HYPDHQ96EM0 354 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 SLC10A4Q96EP9 437 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 HMCESQ96FZ2 354 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 CGREF1Q99674 301 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 GPR21Q99679 349 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 CHCHD6Q9BRQ6 235 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 TMEM246Q9BRR3 403 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 INPP5KQ9BT40 448 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 LRRC3Q9BY71 257 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 ASPSCR1Q9BZE9 553 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 WDR12Q9GZL7 423 aaKnown RBP5.31□□□□□ -1.56
ATG4A-204ENST00000372246 ENTPD7Q9NQZ7 604 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 TRHDEQ9UKU6 1024 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 SBF1O95248 1867 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 MIA3Q5JRA6 1907 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 A0A0G2JMP0 313 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 A0A0X1KG70 313 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 BBIP1A8MTZ0 92 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 H0YAE9 185 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 H3BM21 787 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 H3BRB1 525 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 PIRO00625 290 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 EEDO75530 441 aaKnown RBP5.31□□□□□ -1.56
ATG4A-204ENST00000372246 TOMM70O94826 608 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 CAPN1P07384 714 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 MMP2P08253 660 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 SLC2A4P14672 509 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 GGT1P19440 569 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 SSTR4P31391 388 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 GPR15P49685 360 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 FCGRTP55899 365 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 GPLD1P80108 840 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 GALK2Q01415 458 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 SEMG2Q02383 582 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 ILF2Q12905 390 aaKnown RBP5.31□□□□□ -1.56
ATG4A-204ENST00000372246 PON2Q15165 354 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 CRY1Q16526 586 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 CEP78Q5JTW2 689 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 RBM48Q5RL73 367 aaKnown RBP5.31□□□□□ -1.56
ATG4A-204ENST00000372246 PRAMEF19Q5SWL8 479 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 ZNF691Q5VV52 312 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 CYP20A1Q6UW02 462 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 PAMR1Q6UXH9 720 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 LBX2Q6XYB7 198 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 MBOAT1Q6ZNC8 495 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms