RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 OR2A12Q8NGT7 310 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 ITFG1Q8TB96 612 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 BADQ92934 168 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 CGREF1Q99674 301 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 ACAT2Q9BWD1 397 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 EXD2Q9NVH0 621 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 SMOXQ9NWM0 555 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 FNDC1Q4ZHG4 1894 aaPredicted RBP11.49□□□□□ -0.57
PDE6C-201ENST00000371447 DIRAS1O95057 198 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 TNFAIP8O95379 198 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 SNAP29O95721 258 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 NTRK1P04629 796 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 TFAP2AP05549 437 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 PPM1AP35813 382 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 BDKRB1P46663 353 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 IRX1P78414 480 aaPredicted RBP11.48□□□□□ -0.57
PDE6C-201ENST00000371447 NAE1Q13564 534 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 ZXDCQ2QGD7 858 aaPredicted RBP11.48□□□□□ -0.57
PDE6C-201ENST00000371447 CACHD1Q5VU97 1274 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 DOK6Q6PKX4 331 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 ENPP6Q6UWR7 440 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 EPHX4Q8IUS5 362 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 ADGRG5Q8IZF4 528 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 TSPAN14Q8NG11 270 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 FAM162AQ96A26 154 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 NRTNQ99748 197 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 INPP5KQ9BT40 448 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 HTATIP2Q9BUP3 242 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 NUSAP1Q9BXS6 441 aaKnown RBP11.48□□□□□ -0.57
PDE6C-201ENST00000371447 TRIM54Q9BYV2 358 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 ZDHHC3Q9NYG2 299 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 TMPRSS11EQ9UL52 423 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 INVSQ9Y283 1065 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 ASB3Q9Y575 518 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 IFRD1O00458 451 aaPredicted RBP11.48□□□□□ -0.57
PDE6C-201ENST00000371447 MANBAO00462 879 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 B4GAT1O43505 415 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 TIMP1P01033 207 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 SMIM18P0DKX4 95 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 VARSP26640 1264 aaKnown RBP11.48□□□□□ -0.57
PDE6C-201ENST00000371447 AQP1P29972 269 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 ZFP36L2P47974 494 aaKnown RBP11.48□□□□□ -0.57
PDE6C-201ENST00000371447 CTSCP53634 463 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 ADARP55265 1226 aaKnown RBP11.48□□□□□ -0.57
PDE6C-201ENST00000371447 TRAP1Q12931 704 aaKnown RBP11.48□□□□□ -0.57
PDE6C-201ENST00000371447 CHIT1Q13231 466 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 TBPL2Q6SJ96 375 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 CRTC3Q6UUV7 619 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 ZNF783Q6ZMS7 281 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 ERMP1Q7Z2K6 904 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 EFL1Q7Z2Z2 1120 aaKnown RBP11.48□□□□□ -0.57
PDE6C-201ENST00000371447 ZFAND4Q86XD8 727 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 REM2Q8IYK8 340 aaPredicted RBP11.48□□□□□ -0.57
PDE6C-201ENST00000371447 SLC13A3Q8WWT9 602 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 MPP4Q96JB8 637 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 CCM2LQ9NUG4 571 aaPredicted RBP11.48□□□□□ -0.57
PDE6C-201ENST00000371447 KCTD5Q9NXV2 234 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 ACTR3BQ9P1U1 418 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 RAB26Q9ULW5 256 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 OARD1Q9Y530 152 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 ZFC3H1O60293 1989 aaKnown RBP11.48□□□□□ -0.57
PDE6C-201ENST00000371447 hCG_2014768A0A024R1R8 64 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 A0A1B0GVG6 124 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 TSPAN6O43657 245 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 MATN4O95460 622 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 CLDN9O95484 217 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 SPINT3P49223 89 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 ATP4BP51164 291 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 TPD52P55327 224 aaPredicted RBP11.48□□□□□ -0.57
PDE6C-201ENST00000371447 MEF2AQ02078 507 aaPredicted RBP11.48□□□□□ -0.57
PDE6C-201ENST00000371447 STARD3Q14849 445 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 CDKN3Q16667 212 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 LRRC23Q53EV4 343 aaPredicted RBP11.48□□□□□ -0.57
PDE6C-201ENST00000371447 APIPQ96GX9 242 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 ACPTQ9BZG2 426 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 SPHK2Q9NRA0 654 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 STOML2Q9UJZ1 356 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 SARDHQ9UL12 918 aa11.48□□□□□ -0.57
PDE6C-201ENST00000371447 MRPS23Q9Y3D9 190 aaKnown RBP11.48□□□□□ -0.57
PDE6C-201ENST00000371447 CLOCKO15516 846 aa11.47□□□□□ -0.57
PDE6C-201ENST00000371447 KLK8O60259 260 aa11.47□□□□□ -0.57
PDE6C-201ENST00000371447 E2F6O75461 281 aa11.47□□□□□ -0.57
PDE6C-201ENST00000371447 ZNF682O95780 498 aa11.47□□□□□ -0.57
PDE6C-201ENST00000371447 PGRP06401 933 aa11.47□□□□□ -0.57
PDE6C-201ENST00000371447 BCKDHAP12694 445 aa11.47□□□□□ -0.57
PDE6C-201ENST00000371447 MAP4P27816 1152 aaKnown RBP11.47□□□□□ -0.57
PDE6C-201ENST00000371447 PDHA2P29803 388 aa11.47□□□□□ -0.57
PDE6C-201ENST00000371447 IRF8Q02556 426 aa11.47□□□□□ -0.57
PDE6C-201ENST00000371447 XKR6Q5GH73 641 aa11.47□□□□□ -0.57
PDE6C-201ENST00000371447 SULT1C3Q6IMI6 304 aa11.47□□□□□ -0.57
PDE6C-201ENST00000371447 NEK5Q6P3R8 708 aa11.47□□□□□ -0.57
PDE6C-201ENST00000371447 HID1Q8IV36 788 aa11.47□□□□□ -0.57
PDE6C-201ENST00000371447 C10orf111Q8N326 155 aa11.47□□□□□ -0.57
PDE6C-201ENST00000371447 MARVELD2Q8N4S9 558 aa11.47□□□□□ -0.57
PDE6C-201ENST00000371447 OR2T12Q8NG77 320 aa11.47□□□□□ -0.57
PDE6C-201ENST00000371447 LRRC3Q9BY71 257 aa11.47□□□□□ -0.57
PDE6C-201ENST00000371447 C11orf49Q9H6J7 331 aa11.47□□□□□ -0.57
PDE6C-201ENST00000371447 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.47□□□□□ -0.57
PDE6C-201ENST00000371447 ADGRE2Q9UHX3 823 aa11.47□□□□□ -0.57
PDE6C-201ENST00000371447 CFAP20Q9Y6A4 193 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms