RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 MRFAP1L1Q96HT8 127 aa12.72□□□□□ -0.37
RPF1-201ENST00000370654 LRRC40Q9H9A6 602 aa12.72□□□□□ -0.37
RPF1-201ENST00000370654 LUC7LQ9NQ29 371 aaKnown RBP12.72□□□□□ -0.37
RPF1-201ENST00000370654 CIDEBQ9UHD4 219 aa12.72□□□□□ -0.37
RPF1-201ENST00000370654 FEZ2Q9UHY8 353 aaPredicted RBP12.72□□□□□ -0.37
RPF1-201ENST00000370654 AMFRQ9UKV5 643 aa12.72□□□□□ -0.37
RPF1-201ENST00000370654 KLHL20Q9Y2M5 609 aa12.72□□□□□ -0.37
RPF1-201ENST00000370654 PCDHGA9Q9Y5G4 932 aaKnown RBP12.72□□□□□ -0.37
RPF1-201ENST00000370654 CAPN6Q9Y6Q1 641 aa12.72□□□□□ -0.37
RPF1-201ENST00000370654 SNRNP200O75643 2136 aaKnown RBP12.72□□□□□ -0.37
RPF1-201ENST00000370654 USP9XQ93008 2570 aaPredicted RBP12.72□□□□□ -0.37
RPF1-201ENST00000370654 LRRK2Q5S007 2527 aa12.72□□□□□ -0.37
RPF1-201ENST00000370654 MATN2O00339 956 aa12.71□□□□□ -0.37
RPF1-201ENST00000370654 CHRM5P08912 532 aaPredicted RBP12.71□□□□□ -0.37
RPF1-201ENST00000370654 MSL3P1P0C860 447 aa12.71□□□□□ -0.37
RPF1-201ENST00000370654 ETS1P14921 441 aa12.71□□□□□ -0.37
RPF1-201ENST00000370654 MSNP26038 577 aaKnown RBP12.71□□□□□ -0.37
RPF1-201ENST00000370654 CSE1LP55060 971 aaKnown RBP12.71□□□□□ -0.37
RPF1-201ENST00000370654 RPA4Q13156 261 aa12.71□□□□□ -0.37
RPF1-201ENST00000370654 NCF4Q15080 339 aa12.71□□□□□ -0.37
RPF1-201ENST00000370654 ZNF534Q76KX8 674 aa12.71□□□□□ -0.37
RPF1-201ENST00000370654 GAS2L3Q86XJ1 694 aa12.71□□□□□ -0.37
RPF1-201ENST00000370654 RBMXL3Q8N7X1 1067 aaKnown RBP12.71□□□□□ -0.37
RPF1-201ENST00000370654 C19orf47Q8N9M1 422 aaKnown RBP12.71□□□□□ -0.37
RPF1-201ENST00000370654 GLIS1Q8NBF1 620 aa12.71□□□□□ -0.37
RPF1-201ENST00000370654 SEC14L1Q92503 715 aa12.71□□□□□ -0.37
RPF1-201ENST00000370654 ELMO1Q92556 727 aa12.71□□□□□ -0.37
RPF1-201ENST00000370654 FANCEQ9HB96 536 aa12.71□□□□□ -0.37
RPF1-201ENST00000370654 ETNK1Q9HBU6 452 aa12.71□□□□□ -0.37
RPF1-201ENST00000370654 IMPACTQ9P2X3 320 aa12.71□□□□□ -0.37
RPF1-201ENST00000370654 SERTAD3Q9UJW9 196 aa12.71□□□□□ -0.37
RPF1-201ENST00000370654 ASF1AQ9Y294 204 aa12.71□□□□□ -0.37
RPF1-201ENST00000370654 TDRKHQ9Y2W6 561 aaKnown RBP12.71□□□□□ -0.37
RPF1-201ENST00000370654 MAP4K5Q9Y4K4 846 aa12.71□□□□□ -0.37
RPF1-201ENST00000370654 IQCF5A8MTL0 148 aa12.7□□□□□ -0.38
RPF1-201ENST00000370654 E7EQ34 232 aa12.7□□□□□ -0.38
RPF1-201ENST00000370654 AP2A2O94973 939 aa12.7□□□□□ -0.38
RPF1-201ENST00000370654 GOT2P00505 430 aaKnown RBP12.7□□□□□ -0.38
RPF1-201ENST00000370654 GP1BBP13224 206 aa12.7□□□□□ -0.38
RPF1-201ENST00000370654 SLC9A5Q14940 896 aa12.7□□□□□ -0.38
RPF1-201ENST00000370654 KIAA1328Q86T90 577 aa12.7□□□□□ -0.38
RPF1-201ENST00000370654 LDB1Q86U70 411 aaPredicted RBP12.7□□□□□ -0.38
RPF1-201ENST00000370654 C2orf73Q8N5S3 287 aaPredicted RBP12.7□□□□□ -0.38
RPF1-201ENST00000370654 HDAC10Q969S8 669 aa12.7□□□□□ -0.38
RPF1-201ENST00000370654 HES6Q96HZ4 224 aa12.7□□□□□ -0.38
RPF1-201ENST00000370654 DHCR7Q9UBM7 475 aaKnown RBP12.7□□□□□ -0.38
RPF1-201ENST00000370654 CDYLQ9Y232 598 aa12.7□□□□□ -0.38
RPF1-201ENST00000370654 USP9YO00507 2555 aaPredicted RBP12.7□□□□□ -0.38
RPF1-201ENST00000370654 LIN7AO14910 233 aaPredicted RBP12.69□□□□□ -0.38
RPF1-201ENST00000370654 SEMA7AO75326 666 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 OTX2P32243 289 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 CCR7P32248 378 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 CETN2P41208 172 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 NSG1P42857 185 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 GRB7Q14451 532 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 ITIH4Q14624 930 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 OASLQ15646 514 aaKnown RBP12.69□□□□□ -0.38
RPF1-201ENST00000370654 INPP5JQ15735 1006 aaPredicted RBP12.69□□□□□ -0.38
RPF1-201ENST00000370654 MLIPQ5VWP3 458 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 JMJD6Q6NYC1 403 aaPredicted RBP12.69□□□□□ -0.38
RPF1-201ENST00000370654 PACS1Q6VY07 963 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 ATCAYQ86WG3 371 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 DNAJC22Q8N4W6 341 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 ZNF655Q8N720 491 aaPredicted RBP12.69□□□□□ -0.38
RPF1-201ENST00000370654 LINC01555Q8NAE3 123 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 TTC13Q8NBP0 860 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 C19orf60Q96EN9 201 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 CALR3Q96L12 384 aaKnown RBP12.69□□□□□ -0.38
RPF1-201ENST00000370654 IL17FQ96PD4 163 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 GBP5Q96PP8 586 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 PPP1R2P1Q96PQ5 205 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 BAG1Q99933 345 aaPredicted RBP12.69□□□□□ -0.38
RPF1-201ENST00000370654 MENTQ9BUN1 341 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 VPS37BQ9H9H4 285 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 SYTL2Q9HCH5 934 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 SLC22A11Q9NSA0 550 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 MARCH4Q9P2E8 410 aaPredicted RBP12.69□□□□□ -0.38
RPF1-201ENST00000370654 KRT87PA6NCN2 255 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 LIASO43766 372 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 KRT86O43790 486 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 OR2B3O76000 313 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 ZSCAN5DPP0CG00 497 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 ITGAXP20702 1163 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 SHMT2P34897 504 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 MRPL49Q13405 166 aaKnown RBP12.69□□□□□ -0.38
RPF1-201ENST00000370654 P3H1Q32P28 736 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 TSTD2Q5T7W7 516 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 SLC6A19Q695T7 634 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 MRGPREQ86SM8 312 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 TBC1D21Q8IYX1 336 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 KRT222Q8N1A0 295 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 DTWD1Q8N5C7 304 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 UBL4BQ8N7F7 174 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 GALNT11Q8NCW6 608 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 OR5K2Q8NHB8 316 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 C1orf54Q8WWF1 131 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 TCTN2Q96GX1 697 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 SLC7A5P2Q9GIP4 190 aa12.69□□□□□ -0.38
RPF1-201ENST00000370654 ICE1Q9Y2F5 2266 aa12.68□□□□□ -0.38
RPF1-201ENST00000370654 UTP20O75691 2785 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms