RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 ITGB8P26012 769 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 HPCAL1P37235 193 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 SLC6A11P48066 632 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 NAA20P61599 178 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 C2orf80Q0P641 193 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 ABRAXAS2Q15018 415 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 CPTPQ5TA50 214 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 ANKRD26P1Q6NSI1 321 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 SH2D5Q6ZV89 423 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 MAVSQ7Z434 540 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 CBR4Q8N4T8 237 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 SPPL3Q8TCT6 385 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 WFIKKN2Q8TEU8 576 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 CEP295NLQ96MC4 621 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 C12orf66Q96MD2 445 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 PLEKHG4BQ96PX9 1271 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 GORASP1Q9BQQ3 440 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 SLC7A5P2Q9GIP4 190 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 FARSBQ9NSD9 589 aaKnown RBP6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 GIMAP4Q9NUV9 329 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 RAPGEFL1Q9UHV5 662 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 KNTC1P50748 2209 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 CABIN1Q9Y6J0 2220 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 SGTAO43765 313 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 RASGRP1O95267 797 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 CXCL10P02778 98 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 PAX7P23759 505 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 ARRB2P32121 409 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 ATP6V1E1P36543 226 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 ARL4DP49703 201 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 ERVPABLB-1P60509 514 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 MFSD4BQ5TF39 518 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 FRG2Q64ET8 278 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 FAM47BQ8NA70 645 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 SMARCD2Q92925 531 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 GLYATL1Q969I3 302 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 RAD51AP1Q96B01 352 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 RMND5BQ96G75 393 aaPredicted RBP6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 IL17FQ96PD4 163 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 FRG2BQ96QU4 278 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 CCDC3Q9BQI4 270 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 C9orf16Q9BUW7 83 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 VN1R3Q9BXE9 311 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 NUSAP1Q9BXS6 441 aaKnown RBP6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 CD244Q9BZW8 370 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 ROGDIQ9GZN7 287 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 RIBC2Q9H4K1 309 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 CCDC177Q9NQR7 707 aaPredicted RBP6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 NUP214P35658 2090 aaPredicted RBP6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 PRLP01236 227 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 ANXA6P08133 673 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 ETS2P15036 469 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 ZNF30P17039 623 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 HTR1BP28222 390 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 CCR2P41597 374 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 YAP1P46937 504 aaKnown RBP6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 MTTPP55157 894 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 SLC7A9P82251 487 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 BNIP2Q12982 314 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 HKDC1Q2TB90 917 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 SWT1Q5T5J6 900 aaKnown RBP6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 OR4F3Q6IEY1 312 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 LETMD1Q6P1Q0 360 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 TRAF7Q6Q0C0 670 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 HSD11B1LQ7Z5J1 315 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 CLEC14AQ86T13 490 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 PLD3Q8IV08 490 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 EID3Q8N140 333 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 PIH1D2Q8WWB5 315 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 TFGQ92734 400 aaPredicted RBP6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 ITCHQ96J02 903 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 ZSWIM3Q96MP5 696 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 C1orf21Q9H246 121 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 NKX2-4Q9H2Z4 354 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 OR51B5Q9H339 312 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 RERGLQ9H628 205 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 COQ10BQ9H8M1 238 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 FBXL21Q9UKT6 434 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 STX16O14662 325 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 OR1F1O43749 312 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 KDM1AO60341 852 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 KAT7O95251 611 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 CDH2P19022 906 aaPredicted RBP6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 SSR2P43308 183 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 CLCN4P51793 760 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 HPCAP84074 193 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 SLBPQ14493 270 aaKnown RBP eCLIP6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 CCDC157Q569K6 752 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 RNF220Q5VTB9 566 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 MED27Q6P2C8 311 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 SLC22A15Q8IZD6 547 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 LSMEM2Q8N112 164 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 TCAIMQ8N3R3 496 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 KRTCAP2Q8N6L1 136 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 C1orf52Q8N6N3 182 aaKnown RBP6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 PPCDCQ96CD2 204 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 THAP11Q96EK4 314 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 UBXN10Q96LJ8 280 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 PKP2Q99959 881 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms