RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 SLC38A4Q969I6 547 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 DUSP26Q9BV47 211 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 MAF1Q9H063 256 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 SOX17Q9H6I2 414 aaPredicted RBP15.64■□□□□ 0.09
COL17A1-202ENST00000369733 CCM2LQ9NUG4 571 aaPredicted RBP15.64■□□□□ 0.09
COL17A1-202ENST00000369733 PCDHGB3Q9Y5G1 929 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 ZFP37Q9Y6Q3 630 aaPredicted RBP15.64■□□□□ 0.09
COL17A1-202ENST00000369733 LMO7Q8WWI1 1683 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 K7EPI3 171 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 FFAR2O15552 330 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 DPY19L1Q2PZI1 675 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 GPR142Q7Z601 462 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 ATAD1Q8NBU5 361 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 ARRDC4Q8NCT1 418 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 KLRG1Q96E93 195 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 KCNA7Q96RP8 456 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 HAPLN3Q96S86 360 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 SPON1Q9HCB6 807 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 RNF6Q9Y252 685 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 ZNF780BQ9Y6R6 833 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 TRAV19A0A0A6YYK7 116 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 H0YJX3 145 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 SDHDO14521 159 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 SNNO75324 88 aaPredicted RBP15.63■□□□□ 0.09
COL17A1-202ENST00000369733 DUSP28Q4G0W2 176 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 MED27Q6P2C8 311 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 LBX2Q6XYB7 198 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 FBXO27Q8NI29 283 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 TIFAQ96CG3 184 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 PPP1R16AQ96I34 528 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 TLE6Q9H808 572 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 C3orf14Q9HBI5 128 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 TRPS1Q9UHF7 1281 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 MKLN1Q9UL63 735 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 PEX10O60683 326 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 NIPSNAP2O75323 286 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 GANABQ14697 944 aaKnown RBP15.63■□□□□ 0.09
COL17A1-202ENST00000369733 UTP4Q969X6 686 aaKnown RBP15.63■□□□□ 0.09
COL17A1-202ENST00000369733 PYURFQ96I23 114 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 POLE4Q9NR33 117 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 RUVBL1Q9Y265 456 aaKnown RBP15.63■□□□□ 0.09
COL17A1-202ENST00000369733 PTPRJQ12913 1337 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 ILVBLA1L0T0 632 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 MAGEB3O15480 346 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 IL1BP01584 269 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 PORP16435 677 aaPredicted RBP15.63■□□□□ 0.09
COL17A1-202ENST00000369733 PROZP22891 400 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 CORO1AP31146 461 aaKnown RBP15.63■□□□□ 0.09
COL17A1-202ENST00000369733 SSR2P43308 183 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 NUDT6P53370 316 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 NFKB2Q00653 900 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 TSTQ16762 297 aaKnown RBP15.63■□□□□ 0.09
COL17A1-202ENST00000369733 TMEM53Q6P2H8 277 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 CYP2U1Q7Z449 544 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 ZNF433Q8N7K0 673 aaPredicted RBP15.63■□□□□ 0.09
COL17A1-202ENST00000369733 PIGUQ9H490 435 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 ZNF282Q9UDV7 671 aaPredicted RBP15.63■□□□□ 0.09
COL17A1-202ENST00000369733 SPIN1Q9Y657 262 aaPredicted RBP15.63■□□□□ 0.09
COL17A1-202ENST00000369733 SOWAHBA6NEL2 793 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 CHURC1-FNTBB4DL54 471 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 C22orf31O95567 290 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 CDH4P55283 916 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 DUSP4Q13115 394 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 DSC3Q14574 896 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 KLHL22Q53GT1 634 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 IDNKQ5T6J7 187 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 C9orf64Q5T6V5 341 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 LGI4Q8N135 537 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 EQTNQ9NQ60 294 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 CCDC177Q9NQR7 707 aaPredicted RBP15.63■□□□□ 0.09
COL17A1-202ENST00000369733 PAK6Q9NQU5 681 aaPredicted RBP15.63■□□□□ 0.09
COL17A1-202ENST00000369733 GDAP2Q9NXN4 497 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 EIF3KQ9UBQ5 218 aaKnown RBP15.63■□□□□ 0.09
COL17A1-202ENST00000369733 PHF24Q9UPV7 400 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 UBR1Q8IWV7 1749 aa15.63■□□□□ 0.09
COL17A1-202ENST00000369733 ZNF132P52740 706 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 DCDC1P59894 354 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 EIF2B5Q13144 721 aaKnown RBP15.62■□□□□ 0.09
COL17A1-202ENST00000369733 SIRPB2Q5JXA9 342 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 ZNF678Q5SXM1 525 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 OLFML2AQ68BL7 652 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 C17orf64Q86WR6 236 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 SLC45A3Q96JT2 553 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 OXCT2Q9BYC2 517 aaPredicted RBP15.62■□□□□ 0.09
COL17A1-202ENST00000369733 TMLHEQ9NVH6 421 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 CNOT11Q9UKZ1 510 aaKnown RBP15.62■□□□□ 0.09
COL17A1-202ENST00000369733 MKL2Q9ULH7 1088 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 CREG1O75629 220 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 PEX5LQ8IYB4 626 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 POF1BQ8WVV4 589 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 HERPUD2Q9BSE4 406 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 A0A1B0GVG6 124 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 CLIC1O00299 241 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 ENGP17813 658 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 C9orf131Q5VYM1 1079 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 OR52E8Q6IFG1 317 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 EXOSC8Q96B26 276 aaKnown RBP15.62■□□□□ 0.09
COL17A1-202ENST00000369733 SIPA1Q96FS4 1042 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 FCRL3Q96P31 734 aaPredicted RBP15.62■□□□□ 0.09
COL17A1-202ENST00000369733 TTC24A2A3L6 582 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms