RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 APOA4P06727 396 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 ARSAP15289 507 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 TAC1P20366 129 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 MPLP40238 635 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 EIF2DP41214 584 aaKnown RBP8.63□□□□□ -1.03
TPM3-213ENST00000368545 STC1P52823 247 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 RAB10P61026 200 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 ST8SIA6P61647 398 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 ZKSCAN8Q15776 578 aaPredicted RBP8.63□□□□□ -1.03
TPM3-213ENST00000368545 MUM1Q2TAK8 710 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 FASTKD1Q53R41 847 aaKnown RBP8.63□□□□□ -1.03
TPM3-213ENST00000368545 TMEM215Q68D42 235 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 GRAMD4Q6IC98 578 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 FAM45BPQ6NSW5 357 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 VITQ6UXI7 678 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 RAPH1Q70E73 1250 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 CMC1Q7Z7K0 106 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 CLEC14AQ86T13 490 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 RBM12BQ8IXT5 1001 aaKnown RBP8.63□□□□□ -1.03
TPM3-213ENST00000368545 TTC30BQ8N4P2 665 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 FAM45AQ8TCE6 357 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 ELSPBP1Q96BH3 223 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 LRIG1Q96JA1 1093 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 ELMO2Q96JJ3 720 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 OSBPL1AQ9BXW6 950 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 GPR63Q9BZJ6 419 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 CIPCQ9C0C6 399 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 TRIT1Q9H3H1 467 aaKnown RBP8.63□□□□□ -1.03
TPM3-213ENST00000368545 EBF3Q9H4W6 596 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 ZDHHC6Q9H6R6 413 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 FBXO6Q9NRD1 293 aaPredicted RBP8.63□□□□□ -1.03
TPM3-213ENST00000368545 POLR3BQ9NW08 1133 aaPredicted RBP8.63□□□□□ -1.03
TPM3-213ENST00000368545 DEC1Q9P2X7 70 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 GPR52Q9Y2T5 361 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 PPIL1Q9Y3C6 166 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 ATP23Q9Y6H3 246 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.63□□□□□ -1.03
TPM3-213ENST00000368545 C22orf46C9J442 243 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 HAUS5O94927 633 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 C2P06681 752 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 NEFHP12036 1026 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 MTHFD2P13995 350 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 FOXN2P32314 431 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 SLC8A1P32418 973 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 GRK6P43250 576 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 POLR2LP62875 67 aaKnown RBP8.63□□□□□ -1.03
TPM3-213ENST00000368545 ATG16L1Q676U5 607 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 BRAT1Q6PJG6 821 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 DPY19L3Q6ZPD9 716 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 RABEPKQ7Z6M1 372 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 ANKS4BQ8N8V4 417 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 GPATCH11Q8N954 259 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 OR2A12Q8NGT7 310 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 GIMAP7Q8NHV1 300 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 TSPEARQ8WU66 669 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.63□□□□□ -1.03
TPM3-213ENST00000368545 HEPHQ9BQS7 1158 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 PITPNM3Q9BZ71 974 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 ARRDC1-AS1Q9H2J1 176 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 RABEP2Q9H5N1 569 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 FGFR1OP2Q9NVK5 253 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 ERVK13-1Q9NX77 482 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 IL17CQ9P0M4 197 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 SLCO3A1Q9UIG8 710 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 X6R8D5 127 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 C1orf232A0A0U1RR37 186 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 OR51F1A6NGY5 319 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 BUD23O43709 281 aaKnown RBP8.62□□□□□ -1.03
TPM3-213ENST00000368545 PLIN3O60664 434 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 SLC4A1P02730 911 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 PSMC3P17980 439 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 PPARGP37231 505 aaPredicted RBP8.62□□□□□ -1.03
TPM3-213ENST00000368545 SLC26A3P40879 764 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 ABCG1P45844 678 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 TTPAP49638 278 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 DMTNQ08495 405 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 FZD5Q13467 585 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 RUNX3Q13761 415 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 TANGO2Q6ICL3 276 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 CNSTQ6PJW8 725 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 GDPD4Q6W3E5 623 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 MICALCLQ6ZW33 695 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 CACNA2D3Q8IZS8 1091 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 STK40Q8N2I9 435 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 CCDC63Q8NA47 563 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 HCAR2Q8TDS4 363 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 ZNF75CPQ92670 426 aaPredicted RBP8.62□□□□□ -1.03
TPM3-213ENST00000368545 ZFYVE19Q96K21 471 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 MCCC1Q96RQ3 725 aaPredicted RBP8.62□□□□□ -1.03
TPM3-213ENST00000368545 SUDS3Q9H7L9 328 aaPredicted RBP8.62□□□□□ -1.03
TPM3-213ENST00000368545 MANSC1Q9H8J5 431 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 CAB39LQ9H9S4 337 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 POPDC3Q9HBV1 291 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 SLC6A20Q9NP91 592 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 HPS4Q9NQG7 708 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 ELOVL2Q9NXB9 296 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 MARCH4Q9P2E8 410 aaPredicted RBP8.62□□□□□ -1.03
TPM3-213ENST00000368545 PLA2G4CQ9UP65 541 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 CORO2BQ9UQ03 480 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 ACOT9Q9Y305 439 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms