RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 GPR3P46089 330 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 IRF9Q00978 393 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 PUM1Q14671 1186 aaKnown RBP eCLIP13.51□□□□□ -0.258e-12■■□□□ 12.8
TPM3-211ENST00000368531 TAF1BQ53T94 588 aaPredicted RBP13.51□□□□□ -0.25
TPM3-211ENST00000368531 BEND6Q5SZJ8 279 aaPredicted RBP13.51□□□□□ -0.25
TPM3-211ENST00000368531 LRRC8EQ6NSJ5 796 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 TBC1D1Q86TI0 1168 aaPredicted RBP13.51□□□□□ -0.25
TPM3-211ENST00000368531 DCUN1D3Q8IWE4 304 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 RBM12BQ8IXT5 1001 aaKnown RBP13.51□□□□□ -0.25
TPM3-211ENST00000368531 CYP4X1Q8N118 509 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 KCTD4Q8WVF5 259 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 ASB11Q8WXH4 323 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 NCSTNQ92542 709 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 IL17FQ96PD4 163 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 SRMSQ9H3Y6 488 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 RDH14Q9HBH5 336 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 POLG2Q9UHN1 485 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 ACOT9Q9Y305 439 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 UNC13CQ8NB66 2214 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 A0A087X1B8 175 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 A0A1W2PQM1 296 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 OR6C74A6NCV1 312 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 LILRA5A6NI73 299 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 GFYI3L273 518 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 GOLGA8RI6L899 631 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 AGRPO00253 132 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 BTN3A1O00481 513 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 ZW10O43264 779 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 ZBTB14O43829 449 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 PROS1P07225 676 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 GP1BAP07359 652 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 C8GP07360 202 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 KRT15P19012 456 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 MPSTP25325 297 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 CD1CP29017 333 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 ID4P47928 161 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 E2F1Q01094 437 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 DLG1Q12959 904 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 NR1D2Q14995 579 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.5□□□□□ -0.25
TPM3-211ENST00000368531 TAX1BP1Q86VP1 789 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 MAGEC3Q8TD91 643 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 ZFPM2Q8WW38 1151 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 DLG3Q92796 817 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 RAD51AP1Q96B01 352 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 NXNL1Q96CM4 212 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 GFM1Q96RP9 751 aaKnown RBP13.5□□□□□ -0.25
TPM3-211ENST00000368531 PKP4Q99569 1192 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 UCK1Q9HA47 277 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 OGFRQ9NZT2 677 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 ICKQ9UPZ9 632 aa13.5□□□□□ -0.25
TPM3-211ENST00000368531 PCM1Q15154 2024 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 UQCRHLA0A096LP55 91 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 A0A1W2PPM1 405 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 DUX1O43812 170 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 MT-ND3P03897 115 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 MPOP05164 745 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 UQCRHP07919 91 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 LTA4HP09960 611 aaKnown RBP13.49□□□□□ -0.25
TPM3-211ENST00000368531 POLR2CP19387 275 aaPredicted RBP13.49□□□□□ -0.25
TPM3-211ENST00000368531 CYP2A7P20853 494 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 CCNFP41002 786 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 GLRBP48167 497 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 EPHA4P54764 986 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 ILKQ13418 452 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 TSTA3Q13630 321 aaPredicted RBP13.49□□□□□ -0.25
TPM3-211ENST00000368531 SPIDRQ14159 915 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 GRB7Q14451 532 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 TSNQ15631 228 aaKnown RBP13.49□□□□□ -0.25
TPM3-211ENST00000368531 PHKG1Q16816 387 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 SNAP47Q5SQN1 464 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 ARMC6Q6NXE6 501 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 IRGCQ6NXR0 463 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 MBOAT1Q6ZNC8 495 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 AMIGO1Q86WK6 493 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 PLD6Q8N2A8 252 aaKnown RBP13.49□□□□□ -0.25
TPM3-211ENST00000368531 OR9A1PQ8NGU1 263 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 MCOLN3Q8TDD5 553 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 HNRNPLLQ8WVV9 542 aaKnown RBP13.49□□□□□ -0.25
TPM3-211ENST00000368531 RSC1A1Q92681 617 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 EXT2Q93063 718 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 MTBPQ96DY7 904 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 PDLIM5Q96HC4 596 aaKnown RBP13.49□□□□□ -0.25
TPM3-211ENST00000368531 ZIM3Q96PE6 472 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 NUDT22Q9BRQ3 303 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 DERL2Q9GZP9 239 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 TFB2MQ9H5Q4 396 aaKnown RBP13.49□□□□□ -0.25
TPM3-211ENST00000368531 PPCSQ9HAB8 311 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 PARVBQ9HBI1 364 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 ABCF3Q9NUQ8 709 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 PCMTD2Q9NV79 361 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 ARGLU1Q9NWB6 273 aaPredicted RBP13.49□□□□□ -0.25
TPM3-211ENST00000368531 HRASLS2Q9NWW9 162 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 UTP6Q9NYH9 597 aaKnown RBP13.49□□□□□ -0.25
TPM3-211ENST00000368531 KLHL3Q9UH77 587 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 PDE10AQ9Y233 779 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 PCDHGA1Q9Y5H4 931 aa13.49□□□□□ -0.25
TPM3-211ENST00000368531 DNAH14Q0VDD8 3507 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 GVINP1Q7Z2Y8 2422 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 GSAPA4D1B5 854 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms