RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TBC1D21Q8IYX1 336 aa15.48■□□□□ 0.07
CKS1B-202ENST00000368436 GPR135Q8IZ08 494 aa15.48■□□□□ 0.07
CKS1B-202ENST00000368436 C19orf47Q8N9M1 422 aaKnown RBP15.48■□□□□ 0.07
CKS1B-202ENST00000368436 Q8NA96 180 aa15.48■□□□□ 0.07
CKS1B-202ENST00000368436 ELMO1Q92556 727 aa15.48■□□□□ 0.07
CKS1B-202ENST00000368436 SMAD5Q99717 465 aaKnown RBP15.48■□□□□ 0.07
CKS1B-202ENST00000368436 POLG2Q9UHN1 485 aa15.48■□□□□ 0.07
CKS1B-202ENST00000368436 AMFRQ9UKV5 643 aa15.48■□□□□ 0.07
CKS1B-202ENST00000368436 G3BP2Q9UN86 482 aaKnown RBP15.48■□□□□ 0.07
CKS1B-202ENST00000368436 PADI2Q9Y2J8 665 aa15.48■□□□□ 0.07
CKS1B-202ENST00000368436 AP1M2Q9Y6Q5 423 aa15.48■□□□□ 0.07
CKS1B-202ENST00000368436 CCDC162PA2VCL2 907 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 MIF4GDA9UHW6 222 aaKnown RBP15.47■□□□□ 0.07
CKS1B-202ENST00000368436 C9J4A7 227 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 BHMG1C9JSJ3 638 aaPredicted RBP15.47■□□□□ 0.07
CKS1B-202ENST00000368436 OR2B3O76000 313 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 CHRM5P08912 532 aaPredicted RBP15.47■□□□□ 0.07
CKS1B-202ENST00000368436 CBSLP0DN79 551 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 MSNP26038 577 aaKnown RBP15.47■□□□□ 0.07
CKS1B-202ENST00000368436 FOXN2P32314 431 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 CBSP35520 551 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 ZNF75DP51815 510 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 ATP1A4Q13733 1029 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 INPP5JQ15735 1006 aaPredicted RBP15.47■□□□□ 0.07
CKS1B-202ENST00000368436 ZIC1Q15915 447 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 FHL5Q5TD97 284 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 RHBDD2Q6NTF9 364 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 PEX26Q7Z412 305 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 TRIM73Q86UV7 250 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 HOOK3Q86VS8 718 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 RAB43Q86YS6 212 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 UBL4BQ8N7F7 174 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 RBMXL3Q8N7X1 1067 aaKnown RBP15.47■□□□□ 0.07
CKS1B-202ENST00000368436 ACRBPQ8NEB7 543 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 OR5K2Q8NHB8 316 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 MRFAP1L1Q96HT8 127 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 ALS2CR12Q96Q35 445 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 C17orf62Q9BQA9 187 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 TMEM121Q9BTD3 319 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 LRRC4CQ9HCJ2 640 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 PIH1D1Q9NWS0 290 aaKnown RBP15.47■□□□□ 0.07
CKS1B-202ENST00000368436 SPHK1Q9NYA1 384 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 GPR83Q9NYM4 423 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 OR6C2Q9NZP2 312 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 ASF1AQ9Y294 204 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 R3HDM2Q9Y2K5 976 aaKnown RBP15.47■□□□□ 0.07
CKS1B-202ENST00000368436 ANKRD12Q6UB98 2062 aa15.47■□□□□ 0.07
CKS1B-202ENST00000368436 ESPL1Q14674 2120 aa15.46■□□□□ 0.07
CKS1B-202ENST00000368436 A0A0J9YY10 115 aa15.46■□□□□ 0.07
CKS1B-202ENST00000368436 OR51F1A6NGY5 319 aa15.46■□□□□ 0.07
CKS1B-202ENST00000368436 A6NL46 340 aa15.46■□□□□ 0.07
CKS1B-202ENST00000368436 PLOD1Q02809 727 aaPredicted RBP15.46■□□□□ 0.07
CKS1B-202ENST00000368436 SSPNQ14714 243 aa15.46■□□□□ 0.07
CKS1B-202ENST00000368436 LINC00523Q86TU6 105 aa15.46■□□□□ 0.07
CKS1B-202ENST00000368436 PNPLA2Q96AD5 504 aa15.46■□□□□ 0.07
CKS1B-202ENST00000368436 IP6K3Q96PC2 410 aa15.46■□□□□ 0.07
CKS1B-202ENST00000368436 GBP5Q96PP8 586 aa15.46■□□□□ 0.07
CKS1B-202ENST00000368436 SPRTNQ9H040 489 aaPredicted RBP15.46■□□□□ 0.07
CKS1B-202ENST00000368436 C5AR2Q9P296 337 aa15.46■□□□□ 0.07
CKS1B-202ENST00000368436 PACSIN2Q9UNF0 486 aaPredicted RBP15.46■□□□□ 0.07
CKS1B-202ENST00000368436 NUP210LQ5VU65 1888 aa15.46■□□□□ 0.06
CKS1B-202ENST00000368436 UTP20O75691 2785 aaKnown RBP15.45■□□□□ 0.06
CKS1B-202ENST00000368436 ICE1Q9Y2F5 2266 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 TCRBV7S2A1N4TA0A589 114 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 CCDC78A2IDD5 438 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 ERI2A8K979 691 aaKnown RBP15.45■□□□□ 0.06
CKS1B-202ENST00000368436 AGFG2O95081 481 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 PTMAP06454 111 aaKnown RBP15.45■□□□□ 0.06
CKS1B-202ENST00000368436 CD63P08962 238 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 OR56A5P0C7T3 313 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 OTX2P32243 289 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 BRD3Q15059 726 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 SLC5A12Q1EHB4 618 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 CCDC38Q502W7 563 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 MLIPQ5VWP3 458 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 LYPLAL1Q5VWZ2 237 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 SLC6A19Q695T7 634 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 NAPRTQ6XQN6 538 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 SYCE1Q8N0S2 351 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 DNAJC22Q8N4W6 341 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 OR52K1Q8NGK4 314 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 OR13J1Q8NGT2 312 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 PROKR1Q8TCW9 393 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 N4BP2L2Q92802 583 aaPredicted RBP15.45■□□□□ 0.06
CKS1B-202ENST00000368436 SGSM3Q96HU1 749 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 SLAMF7Q9NQ25 335 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 RIMKLBQ9ULI2 386 aa15.45■□□□□ 0.06
CKS1B-202ENST00000368436 TDRKHQ9Y2W6 561 aaKnown RBP15.45■□□□□ 0.06
CKS1B-202ENST00000368436 SPTAN1Q13813 2472 aaKnown RBP15.45■□□□□ 0.06
CKS1B-202ENST00000368436 PCM1Q15154 2024 aa15.44■□□□□ 0.06
CKS1B-202ENST00000368436 RP1L1Q8IWN7 2480 aaPredicted RBP15.44■□□□□ 0.06
CKS1B-202ENST00000368436 SUN1O94901 812 aa15.44■□□□□ 0.06
CKS1B-202ENST00000368436 CTSBP07858 339 aa15.44■□□□□ 0.06
CKS1B-202ENST00000368436 VARSP26640 1264 aaKnown RBP15.44■□□□□ 0.06
CKS1B-202ENST00000368436 PEBP1P30086 187 aaKnown RBP15.44■□□□□ 0.06
CKS1B-202ENST00000368436 STIP1P31948 543 aaKnown RBP15.44■□□□□ 0.06
CKS1B-202ENST00000368436 DCDP81605 110 aaKnown RBP15.44■□□□□ 0.06
CKS1B-202ENST00000368436 ACVR1Q04771 509 aa15.44■□□□□ 0.06
CKS1B-202ENST00000368436 CDH17Q12864 832 aa15.44■□□□□ 0.06
CKS1B-202ENST00000368436 KIR2DS3Q14952 304 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms