RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 KAT8Q9H7Z6 458 aaKnown RBP11.46□□□□□ -0.58
COPA-202ENST00000368069 WDR6Q9NNW5 1121 aaKnown RBP11.46□□□□□ -0.58
COPA-202ENST00000368069 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.46□□□□□ -0.58
COPA-202ENST00000368069 ZDHHC3Q9NYG2 299 aa11.46□□□□□ -0.58
COPA-202ENST00000368069 SEC14L3Q9UDX4 400 aa11.46□□□□□ -0.58
COPA-202ENST00000368069 ZNF232Q9UNY5 417 aa11.46□□□□□ -0.58
COPA-202ENST00000368069 PCDHGA11Q9Y5H2 935 aa11.46□□□□□ -0.58
COPA-202ENST00000368069 GOLGA4Q13439 2230 aaKnown RBP11.46□□□□□ -0.58
COPA-202ENST00000368069 CENPXA8MT69 81 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 ZNF12P17014 697 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 MAPK9P45984 424 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 PM20D1Q6GTS8 502 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 NANOGP8Q6NSW7 305 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 PRR23BQ6ZRT6 265 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 OR10Q1Q8NGQ4 319 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 TEX47Q8TBZ9 253 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 KCNJ9Q92806 393 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 SLC32A1Q9H598 525 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 NANOGQ9H9S0 305 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 COQ6Q9Y2Z9 468 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 LOC110117498-PIK3R3F6TDL0 507 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 MANBAO00462 879 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 SNPHO15079 494 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 MTX2O75431 263 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 PGRP06401 933 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 NR2F6P10588 404 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 IL7RP16871 459 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 IL12RB1P42701 662 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 SLC11A1P49279 550 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 ALDH3A2P51648 485 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 CASP9P55211 416 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 TMEM220Q6QAJ8 160 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 RNF19BQ6ZMZ0 732 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 TMEM199Q8N511 208 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 PNPLA1Q8N8W4 532 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 XAGE5Q8WWM1 108 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 RANBP9Q96S59 729 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 AIF1LQ9BQI0 150 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 HEPHQ9BQS7 1158 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 TPK1Q9H3S4 243 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 ZNF624Q9P2J8 865 aaPredicted RBP11.45□□□□□ -0.58
COPA-202ENST00000368069 GULP1Q9UBP9 304 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 GPSM3Q9Y4H4 160 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 CYP11A1P05108 521 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 PYDC2Q56P42 97 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 SYVN1Q86TM6 617 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 SLC15A3Q8IY34 581 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 COPS4Q9BT78 406 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 SPRTNQ9H040 489 aaPredicted RBP11.45□□□□□ -0.58
COPA-202ENST00000368069 CCM2LQ9NUG4 571 aaPredicted RBP11.45□□□□□ -0.58
COPA-202ENST00000368069 EXD2Q9NVH0 621 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 TUBA8Q9NY65 449 aaPredicted RBP11.45□□□□□ -0.58
COPA-202ENST00000368069 PTBP2Q9UKA9 531 aaKnown RBP11.45□□□□□ -0.58
COPA-202ENST00000368069 FADS2P1A8MWK0 482 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 CLIC1O00299 241 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 PLK4O00444 970 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 CA12O43570 354 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 PCSK2P16519 638 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 TNNI3P19429 210 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 PRPS1L1P21108 318 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 TEAD4Q15561 434 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 MYLK3Q32MK0 819 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 IFI44LQ53G44 452 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 UBXN11Q5T124 520 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 ZNF697Q5TEC3 545 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 ZZZ3Q8IYH5 903 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 CAMKK1Q8N5S9 505 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 RHEBL1Q8TAI7 183 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 EXOSC8Q96B26 276 aaKnown RBP11.45□□□□□ -0.58
COPA-202ENST00000368069 C1QTNF7Q9BXJ2 289 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 C20orf27Q9GZN8 174 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 SYNDIG1Q9H7V2 258 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 CCDC177Q9NQR7 707 aaPredicted RBP11.45□□□□□ -0.58
COPA-202ENST00000368069 SEMA3GQ9NS98 782 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 TMLHEQ9NVH6 421 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 RNF11Q9Y3C5 154 aa11.45□□□□□ -0.58
COPA-202ENST00000368069 NRAPQ86VF7 1730 aa11.44□□□□□ -0.58
COPA-202ENST00000368069 UNCXA6NJT0 531 aa11.44□□□□□ -0.58
COPA-202ENST00000368069 AURKAO14965 403 aa11.44□□□□□ -0.58
COPA-202ENST00000368069 DENRO43583 198 aaKnown RBP11.44□□□□□ -0.58
COPA-202ENST00000368069 ENGP17813 658 aa11.44□□□□□ -0.58
COPA-202ENST00000368069 GLDCP23378 1020 aa11.44□□□□□ -0.58
COPA-202ENST00000368069 CSNK2BP67870 215 aa11.44□□□□□ -0.58
COPA-202ENST00000368069 MS4A2Q01362 244 aa11.44□□□□□ -0.58
COPA-202ENST00000368069 CARTPTQ16568 116 aa11.44□□□□□ -0.58
COPA-202ENST00000368069 DEFB115Q30KQ5 88 aa11.44□□□□□ -0.58
COPA-202ENST00000368069 ZNF789Q5FWF6 425 aa11.44□□□□□ -0.58
COPA-202ENST00000368069 TXNDC8Q6A555 127 aa11.44□□□□□ -0.58
COPA-202ENST00000368069 ZNF598Q86UK7 904 aaKnown RBP11.44□□□□□ -0.58
COPA-202ENST00000368069 ZNF513Q8N8E2 541 aaPredicted RBP11.44□□□□□ -0.58
COPA-202ENST00000368069 OR52L1Q8NGH7 329 aa11.44□□□□□ -0.58
COPA-202ENST00000368069 STON2Q8WXE9 905 aa11.44□□□□□ -0.58
COPA-202ENST00000368069 SUV39H2Q9H5I1 410 aa11.44□□□□□ -0.58
COPA-202ENST00000368069 SOX17Q9H6I2 414 aaPredicted RBP11.44□□□□□ -0.58
COPA-202ENST00000368069 AMBNQ9NP70 447 aa11.44□□□□□ -0.58
COPA-202ENST00000368069 IMP3Q9NV31 184 aaKnown RBP11.44□□□□□ -0.58
COPA-202ENST00000368069 TBC1D14Q9P2M4 693 aa11.44□□□□□ -0.58
COPA-202ENST00000368069 A0A1W2PPW3 197 aa11.44□□□□□ -0.58
COPA-202ENST00000368069 AP3D1O14617 1153 aa11.44□□□□□ -0.58
COPA-202ENST00000368069 ENO2P09104 434 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms